| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_1431 |
|---|
| Symbol | |
|---|
| ID | 4450317 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | + |
|---|
| Start bp | 1579494 |
|---|
| End bp | 1580453 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639693469 |
|---|
| Product | RpiR family transcriptional regulator |
|---|
| Protein accession | YP_835076 |
|---|
| Protein GI | 116689453 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1737] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.51372 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATCCAG TCGAGCCCCG GGCCGCGCCG GCCAGCCGCG CGCGCGCATC GGGGCCGTCA
ACTTCGCGCT ATCCGATGAG CTCATCCGAG AAACCTCCCG CCACCGTCGA GGCGTTCCTG
CAGCACCTGA CGCAGGAGTA CGACGGCCTC AGCAATCGCC TGAAGGTGAT CGCGCGCCAC
GTGGAAACGC ATCGGGACCA GCTTGGGCTG GAAGGCATCC AGTCGCTCGC GGAAGCCTGC
GGCGTCCAGC CGTCGGCCGT CGTGCGCTTC GCGAAGCACT TCGGCTTCTC CGGTTTCTCC
GAGATGCAGC GGCTGTTCCG CGAGGGGCTC GCGCAGCAGA TCGCGCCGGG GCGTGCGTAC
AACCTGCGGC TGCGCGACGT GATCGAAGCC GGCTCGTCGA GCCTGCAGCC CGAACAGATC
GCCGACGAAT TCATCAAGGG CAGCATTGCC GGGATGCAGC AGTTGCGGCA GACGCTCGAT
TCGCACGCAC TCGCGCAGGC CGTCGACCTG CTCGCCGATA CGCAGGCGAT CTGGATCGCC
GGGTCGCGGC GTGCATTTCC GATCGCCGTG TATCTCGACT ATGCGCTGCA GCACACCGAC
AAGCGCATCG GGCTGTTCGA CGCGCTCGGC AGCATGCATC TCGGCCAGAT CCGCTCGGTG
CGCAAGGGCG ACGTGATGAT CGCGATCTCG TTCATGCCGT ATGCGGACGA GACCGTGCAG
GTCGCGCAGC AGGCCGCGCA GCGCGGCGCA CGCTTGATCG CGATCACCGA CAGCCGGATG
AGCCCGCTCG CGCGGGAGGC GGAAGTGACG TTGATGGTGC AGGACAGCGC GACGTTCGGT
TTCCGCGCGC TGACGGCCAC GATGGGTCTC GCGCAGAGCC TGTTCGTCGC GCTCGCGTAC
CGGCTGGAGC TGTCGTACCT GCCGACCGCC GACGGCACGC ACGGCACGAA GGCCGGTTGA
|
|---|
| Protein sequence | MYPVEPRAAP ASRARASGPS TSRYPMSSSE KPPATVEAFL QHLTQEYDGL SNRLKVIARH
VETHRDQLGL EGIQSLAEAC GVQPSAVVRF AKHFGFSGFS EMQRLFREGL AQQIAPGRAY
NLRLRDVIEA GSSSLQPEQI ADEFIKGSIA GMQQLRQTLD SHALAQAVDL LADTQAIWIA
GSRRAFPIAV YLDYALQHTD KRIGLFDALG SMHLGQIRSV RKGDVMIAIS FMPYADETVQ
VAQQAAQRGA RLIAITDSRM SPLAREAEVT LMVQDSATFG FRALTATMGL AQSLFVALAY
RLELSYLPTA DGTHGTKAG
|
|---|
| |