Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_1374 |
Symbol | |
ID | 4449854 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | + |
Start bp | 1512153 |
End bp | 1512758 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639693412 |
Product | CDP-alcohol phosphatidyltransferase |
Protein accession | YP_835019 |
Protein GI | 116689396 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0558] Phosphatidylglycerophosphate synthase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0055276 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCCTCT ACGCACTCAA ACCCAAATTC CAGAATCGTC TGCGCCCGTT CGCGGATTCG CTCGCCGAAC GCGGCGTCAC GGCCAACCAG GTCACGCTGT TCGCGGCAGG CGGCTCGATC GTCGTCGGCG CGCTCGCCGG GCTCGGCGTG TTCGCCCGCG CGCTGTTCCT GCTGATCCCG CTGTGGCTGT TCGCGCGGAT GGCGCTCAAC GCGATCGACG GGATGCTCGC GCGCGAGCAC GGGCAGAAGA GCACGCTCGG CGCCTACCTG AACGAGCTGG GCGACATCGT GTCCGACGTC GCGCTCGTGC TGCCGTTCCT CGCCATTCCC GCGTTCGCTC CGGCGGACGT CTGGCTGTTC GCGCTGACGG CGGTGATCGT CGAATGCGCG GGGCTGATCG GCCCGCTCGT CGGTGCGACG CGCCGCTACG ACGGCCCGTT CGGCAAAAGC GACCGGGCGC TGGCCCTCGG CGCGTTCGCA CTGTGGATCG GCTTCGGTCT GCCGGTGGGC AGCGTCGGCG CCTGGCTGTG GCGGCTGCTG ATCGTGCTGT CGATCGTGAC GGTGGTGCGG CGCGTCCGGG CCGGGATCAC CGAAGCGGGC GGCTGA
|
Protein sequence | MSLYALKPKF QNRLRPFADS LAERGVTANQ VTLFAAGGSI VVGALAGLGV FARALFLLIP LWLFARMALN AIDGMLAREH GQKSTLGAYL NELGDIVSDV ALVLPFLAIP AFAPADVWLF ALTAVIVECA GLIGPLVGAT RRYDGPFGKS DRALALGAFA LWIGFGLPVG SVGAWLWRLL IVLSIVTVVR RVRAGITEAG G
|
| |