Gene Bcen2424_1359 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_1359 
Symbol 
ID4449839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp1496990 
End bp1497499 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content70% 
IMG OID639693397 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_835004 
Protein GI116689381 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGCTG ACAAGCTGTC CCTCCATCGA GAAATCGACG CCCTCTATGT CGGCCACCAC 
GCGTGGCTGC GCGGCTGGCT GAGCCGGAAG CTCGGTTGCG CACACCGCGC GGCCGACCTG
GCGCACGACA CGTTCGTGCG CCTGCTCGCA CGCGACGAGC CGATCGGCGC CGACGAGCCG
CGTGCGTTCC TGACCACGGT CGCGCAGCGT GTGCTGAGCA ACCACTGGCG GCGCGAGCAG
ATCGAGCGCG CGTATCTCGA CGTGCTCGCG CAGCGCCCGG AAGCGGTTGG GCCGTCGCCG
GAAGAGCGGG CCGTCATGGT CGAGACGCTG CTCGAGATCG ACCGGCTGCT CGACGGCCTG
CCGCCCGCGG CGAAGCGTGC GTTCCTGCTC GCACAGCTCG ACGGGCTCAC GCAGGTCGAG
ATCGCGCGCC AGCTCGGCGT GTCGCTCGCG ACGGTGAAGC GCTATCTCGT GAAGGCCGGC
ACGCAGTGCT TCTTCGCGAT GGCGGCCTGA
 
Protein sequence
MSADKLSLHR EIDALYVGHH AWLRGWLSRK LGCAHRAADL AHDTFVRLLA RDEPIGADEP 
RAFLTTVAQR VLSNHWRREQ IERAYLDVLA QRPEAVGPSP EERAVMVETL LEIDRLLDGL
PPAAKRAFLL AQLDGLTQVE IARQLGVSLA TVKRYLVKAG TQCFFAMAA