Gene Bcen2424_1171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_1171 
Symbol 
ID4449454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp1286176 
End bp1287597 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content62% 
IMG OID639693207 
Productradical SAM domain-containing protein 
Protein accessionYP_834816 
Protein GI116689193 
COG category[C] Energy production and conversion 
COG ID[COG1032] Fe-S oxidoreductase 
TIGRFAM ID[TIGR03471] hopanoid biosynthesis associated radical SAM protein HpnJ 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.397655 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACGC TGTTCTTGCA GGCCCCTTCG TATGACGGCT TCGACGGCGG AGCCGGCTCG 
CGCTATCAGG CGAAGCGCGA AATCCGTTCC TTCTGGTATC CGACCTGGCT CGCGCAGCCG
GCCGCGCTCG TGCCGGGCAG CCGCGTCGTC GATGCGCCGG CCGACGGCCT GTCGGTCGAG
GAAACGCTGA AGATCGCCAA CGACTACGAC CTCGTGATCA TCCACACGAG CACGCCGTCG
TTCCCGACCG ACGCGATGTT CGCGCAGGAT CTGAAGAAGA TGAAGCCGTC GATGCTCGTC
GGCATGGTCG GCGCGAAGGT GATGGTCGAT CCGCACAACT CGCTCACGGC GAGCGAGGCG
ATCGACTTCG TGTGCCGCGA GGAATTCGAC TACACCTGCA AGGAGCTCGC CGAAGGCAAG
CCGTTCCCCG AGATCAAGGG CTTGAGCTGG CGCGCGAAGG ACGGCTCGAT CGAGCACAAC
GAAGCGCGTC CGATCCTCGA GAACATGGAC GAACTGCCGT TCGTCGCGCC CGTCTACAAG
CGCGACCTGA AGATCGACAA CTACTTCATC GGCTACCTGA ACTATCCGTA CGTGTCGATC
TACACGGGCC GCGGCTGCAA GTCGCGCTGC ACGTTCTGCC TGTGGCCGCA GACGGTCAGC
GGCCATCGCT ACCGCACGCG CTCGGTCGAG AACGTGCTCG CGGAAGCGAA GTGGATTCGC
GACAACATGC CGGAAGTGAA GGAACTGATG TTCGACGACG ACACCTTCAC CGACGACCTG
CCGCGCGCCG AAGCCATCGC CATCGGCCTG GGCAAGCTCG GCATCACGTG GTCGTGCAAC
GCGAAGGCCA ACGTGCCGTA CAAGTCGCTG AAGATCATGA AGGAAAACGG CCTGCGCCTG
TTGCTGGTCG GCTTCGAATC GGGCGACGAC CAGATCCTCG TGAACATCAA GAAGGGCGTG
CGCACCGATT TCGCGCGCCG TTTCAGCGCG GACTGCAAGA AGCTCGGCAT CAAGATCCAC
GGCACCTTCA TCCTCGGCCT GCCGGGCGAG ACGCAGGAAA CCATCAAGAA GACGATCGAG
TACGCGAAGG AAATCAATCC GCATACGATC CAGGTGTCCC TCGCCGCGCC GTATCCGGGC
ACGACGCTGT ACAAGCAGGC CGTGGAAAAC GGCTGGATGG AAGAGAACAA GACCATCAAC
CTGGTCAGCA AGGAAGGCGT GCAGCTCGCG GCGATCGGCT ATGCGCACCT GTCGCGCGAC
GAGATCTACC ACCATCTCGA GCAGTTCTAT CGCGAGTTCT ATTTCCGTCC GTCGAAGATC
TGGGAAATCG TGCGCGAGAT GCTGACGAGC TGGGACATGA TGAAGCGTCG CCTGCGCGAA
GGCGTCGAGT TCTTCCGCTT CCTGCGCGCG CACGAGGCCT GA
 
Protein sequence
MKTLFLQAPS YDGFDGGAGS RYQAKREIRS FWYPTWLAQP AALVPGSRVV DAPADGLSVE 
ETLKIANDYD LVIIHTSTPS FPTDAMFAQD LKKMKPSMLV GMVGAKVMVD PHNSLTASEA
IDFVCREEFD YTCKELAEGK PFPEIKGLSW RAKDGSIEHN EARPILENMD ELPFVAPVYK
RDLKIDNYFI GYLNYPYVSI YTGRGCKSRC TFCLWPQTVS GHRYRTRSVE NVLAEAKWIR
DNMPEVKELM FDDDTFTDDL PRAEAIAIGL GKLGITWSCN AKANVPYKSL KIMKENGLRL
LLVGFESGDD QILVNIKKGV RTDFARRFSA DCKKLGIKIH GTFILGLPGE TQETIKKTIE
YAKEINPHTI QVSLAAPYPG TTLYKQAVEN GWMEENKTIN LVSKEGVQLA AIGYAHLSRD
EIYHHLEQFY REFYFRPSKI WEIVREMLTS WDMMKRRLRE GVEFFRFLRA HEA