| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_1166 |
|---|
| Symbol | |
|---|
| ID | 4449328 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | - |
|---|
| Start bp | 1278638 |
|---|
| End bp | 1280782 |
|---|
| Gene Length | 2145 bp |
|---|
| Protein Length | 714 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639693202 |
|---|
| Product | phospholipase C |
|---|
| Protein accession | YP_834811 |
|---|
| Protein GI | 116689188 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3511] Phospholipase C |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR03396] phospholipase C, phosphocholine-specific, Pseudomonas-type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.371643 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGAT CGAACCGTCG TGACTTCCTG CGCGTCGCCG CCGGCACTGC CGGCGCCGCC
GCGCTGAACC TGTTTCCGCC CGTGATCCGG GATGCGCTCG CGATTCCCGC GAACCGCCGC
ACCGGCACGA TCCGCGACAT CGAACACATC GTGATCCTGA TGCAGGAGAA CCGCTCGTTC
GACCACTACT TCGGCACGAT GCGCGGTGTC CGCGGCTTCG GTGACCCGCG CCCGTTGCGC
CTCGCGAACG GCAAGTCGGT GTTTCACCAG CCGGTCGGCC CGGCCGAACT GCTGCCGTTC
CACCCGGGCG TCGACAAGCT CGGCCTGCAG TTCCTGCAGG ACCTGCCGCA CGGCTGGCAG
GACATGCACG CCGCCTGGAA CAAGGGCCGC TACGACCAGT GGGTGCCGAA CAAGGGCACC
ACGACGATGG CGTACCTGAA GCGCGACGAC ATCCCGTTCC ACTATCAGCT CGCCGACGCG
TTCACGATCT GCGACGCATA CCACTGCGCG ATCCCGAGCT CGACCGACCC GAACCGCTAC
TACATGTGGA CGGGCTACGT CGGCAACGAC GGCACGGGCG GGGGTCCGGT GCTCGGCAAC
GAGGAAAAGG GCTACGGCTG GACGACCTAT CCGGAAGTGC TCGAACAGGC CGGCGTGTCG
TGGAAGATCT ACCAGGACGT CGGCACGGGG CTCGACGCGA ACGGCTCGTG GGGCTGGACG
CAAAACCCGT ACATCGGCAA CTACGGCGAC AACTCGCTGC TCTACTTCAA CCAGTACCGC
TCCGCGCTGC CCGGCACGCC GCTGTACGAC AAGGCGCGCA CCGGCACCAA CATCAGCGCC
GGCGGCACGC TGTTCGACGT GCTGCAGCAG GACGTGAAGA ACGGCACGCT GCCGCAGGTG
TCGTGGATCT GCGCGCCCGA AGCGTATTCC GAGCACCCGA ACTGGCCGGC GAACTATGGC
GCGTGGTACA TCGAGCAGGT GCTGAAGGCG CTCGTGTCGA ATCCCGACGT GTGGAGCAAG
ACCGCGCTGT TCATCACGTA CGACGAAAAC GACGGCTTCT TCGATCACGT GCCGCCGCCG
TTCGCGCCGC AGTCGCGCGA GAACGGGCTG TCGACGGTCG CGACGACCAA CGAGGTGTTC
GCCGGCGACG CGTCGCACAT GGCCGGCCCT TACGGGCTCG GGCCGCGCGT GCCGATGCTG
GTCGTGTCGC CGTGGACCAA GGGCGGCTGG GTCTGCTCGC AGACCTTCGA TCACACGTCG
CTGCTGCAAT TCATCGAGGC GCGCTTCGGC GCGCAGTATC CGGTCACGGC CGCCAACGTG
TCGCCGTGGC GCCGCGCGGT GTGCGGCGAC CTGACGTCGG CGTTCGAGTT CGCGACCGCG
GACGCCGCAT GGCCGACGCT GCCCGACACC AGCGGCTACG CGCCGCCCGA CCGCGTGCGC
CATCCCGACT ACATCCCGGT GCCGCCGGTG CTGCAGAAGC TGCCGAAACA GGAAGCCGGG
CTGCGTCCGG CGCGCGCTCT GCCGTACGAG CTGTTCGTGC ACGGCCGCGT CGAAGCCGCC
AACGGCCAGT TCCGGCTGAC CTTCGCGAAC ACGGGCCGGG CGGGCGCCGC GTTCCAGGTC
CAGTCGCGCA ACCGCGTCGA CGGCCCGTGG GCGTACACGG TCGAAGCCGG CAAACGTATC
GCCGATACGT GGAGCGCCGC CGCATCGCTC GGCCTGTACG ACCTCGACGT ATACGGCCCG
AACGGCTTCT ACTGCCATTT CCGCGGCCCG TTCGCGACCG GGGTCGGCAG CGCGGACGTG
AACCCCGAGG TGATCTACGG CTACGACGTC GCGAACGGCA ACATCACGCT GCGCCTGATG
AACCGCGGCC ACAAGGCCGT GCGGCTCAAG GTCACGAACG CGTACGGCCA CGGTCACGCG
CGCACGTTCG ACCTCGCGCC GGGCGCGCAC GTCGACGATT ACTGGGACCT GCGCGGCAGC
CACGGCTGGT ACGACCTCAC CGTCAGCGAC GGCCGCCTGC TCGGCTTCCT GCGCCGCTTC
GCCGGCCACG TCGAAACGGG CCGCCCGAGC ACCAGCGACC CGCTGATCCG CACGACCGCG
TCGCACGACG ACGCCGAAGC CGCGTCGGAC GCCCTGTCCG ACTGA
|
|---|
| Protein sequence | MTRSNRRDFL RVAAGTAGAA ALNLFPPVIR DALAIPANRR TGTIRDIEHI VILMQENRSF
DHYFGTMRGV RGFGDPRPLR LANGKSVFHQ PVGPAELLPF HPGVDKLGLQ FLQDLPHGWQ
DMHAAWNKGR YDQWVPNKGT TTMAYLKRDD IPFHYQLADA FTICDAYHCA IPSSTDPNRY
YMWTGYVGND GTGGGPVLGN EEKGYGWTTY PEVLEQAGVS WKIYQDVGTG LDANGSWGWT
QNPYIGNYGD NSLLYFNQYR SALPGTPLYD KARTGTNISA GGTLFDVLQQ DVKNGTLPQV
SWICAPEAYS EHPNWPANYG AWYIEQVLKA LVSNPDVWSK TALFITYDEN DGFFDHVPPP
FAPQSRENGL STVATTNEVF AGDASHMAGP YGLGPRVPML VVSPWTKGGW VCSQTFDHTS
LLQFIEARFG AQYPVTAANV SPWRRAVCGD LTSAFEFATA DAAWPTLPDT SGYAPPDRVR
HPDYIPVPPV LQKLPKQEAG LRPARALPYE LFVHGRVEAA NGQFRLTFAN TGRAGAAFQV
QSRNRVDGPW AYTVEAGKRI ADTWSAAASL GLYDLDVYGP NGFYCHFRGP FATGVGSADV
NPEVIYGYDV ANGNITLRLM NRGHKAVRLK VTNAYGHGHA RTFDLAPGAH VDDYWDLRGS
HGWYDLTVSD GRLLGFLRRF AGHVETGRPS TSDPLIRTTA SHDDAEAASD ALSD
|
|---|
| |