Gene Bcen2424_1127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_1127 
Symbol 
ID4448678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp1237457 
End bp1238056 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content60% 
IMG OID639693159 
ProductRNA polymerase sigma factor RpoE 
Protein accessionYP_834772 
Protein GI116689149 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02939] RNA polymerase sigma factor RpoE 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTGAAA AAGAAATCGA TCAGGCTCTG GTCGAGCGCG TACAGAAGGG CGACAAGGCG 
GCGTTCGAAC TCCTGGTCTC CAAATACCAC CGCAAGATCA TTCGGCTGAT CTCGCGCCTC
GTGCGGGATC CCGCCGAGGT CGAGGATGTG GCTCAGGACG CGTTCATCAA GGCGTATCGT
GCGCTGCCGC AATTCCGCGG CGAATCGGCG TTCTATACGT GGTTGTACCG AATTGCCGTC
AACACGGCGA AGAACTACCT TGCGACGCAA GGCCGCCGGG CGCCGACCTC GACCGAGGCC
GATGCGGAGG AAGCGGAAAC TTTCTCCGAC GCAGACCAAC TAAGGGATAT CAACACGCCT
GAGTCGATGT TGATGAGCAA GCAGATTGCC GAGACGGTCA ACGCTGCGAT GGCTCTGCTG
CCCGAAGAAC TGCGCCAGGC AATCACGCTG CGCGAGATCG AGGGCCTGAG CTACGAAGAG
ATCGCGGAAA TGATGGGCTG TCCAATCGGG ACGGTCCGGT CGCGGATTTT CCGTGCGCGC
GAGGCAATCG CTGCCAAATT GCGTCCGCTG CTCGATACGC CCGAAGGCAA GCGCTGGTAA
 
Protein sequence
MSEKEIDQAL VERVQKGDKA AFELLVSKYH RKIIRLISRL VRDPAEVEDV AQDAFIKAYR 
ALPQFRGESA FYTWLYRIAV NTAKNYLATQ GRRAPTSTEA DAEEAETFSD ADQLRDINTP
ESMLMSKQIA ETVNAAMALL PEELRQAITL REIEGLSYEE IAEMMGCPIG TVRSRIFRAR
EAIAAKLRPL LDTPEGKRW