| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_1103 |
|---|
| Symbol | |
|---|
| ID | 4448350 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | + |
|---|
| Start bp | 1214879 |
|---|
| End bp | 1215868 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639693136 |
|---|
| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
|---|
| Protein accession | YP_834749 |
|---|
| Protein GI | 116689126 |
|---|
| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.341973 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAAGA TCCTGGTCGC GCGTCCGATC TTTCCGGACG TGATCGAACG GCTCAAGCAG
TATTTCGACG TCGACTGGAA CGACGGCGAC GCGCTCGCGC CCGACGCGCT CGCCGCGCGT
CTGGCCGACA AGGACGGCGC GCTGACGGCC GGCGATCCGG TCGGCGCGGC CACGCTCGCG
GCGGCGCCAC GCCTGCGGGT CGTGGCGAAC ATGGCGGTCG GCTACAACAA CTTTGACATG
GCTGCGTTCA ACGCGGCGAA CGTGCTCGGC ACCAACACGC CCGACGTGCT GAACGAGTCG
ACCGCCGATT TCGGCTGGGC GCTGATGATG GCCGCCGCGC GCCGGATCGC CGAATCGGAA
CACTGGCTGC GCGCCGGTCA CTGGCAGAAG TGGGCGTACG ACGGCTTTCT CGGCACCGAT
ATCCACGGCT CGACGCTCGG CGTGATCGGG ATGGGCCGCA TCGGCCAGGC GCTCGCGCGC
CGCGCGCGCG GCTTCGGGAT GCAGGTGATC TATCACAACC GGTCGCGGGT CGCGCCGGAG
ATCGAGGCCG AGCTGAATGC CGAATACGTG TCGAAGGATG CGCTGCTCGC GCGCGCCGAT
CATGTCGTGC TCGTGCTGCC GTACACCCAG GAGAACCATC ACACGATCGG CGCGGCCGAG
CTCGCGAAGA TGAAACCCAC GGCGACGCTG ACCAATATCG CGCGCGGCGG GATCGTCGAC
GATGCGGCGC TGGCCGTCGC GCTGCGCGAC GGGACGATCG CCGCGGCCGG CCTCGACGTG
TACGAGGGCG AGCCGAGCGT GCATCCGGCG CTGCTCGAGG TGCCGAACGT CGTGCTGACG
CCGCATATCG CGAGCGCGAC CGAAAAGACC CGCCGCGCGA TGGCGAATCT CGCTGCCGAC
AACCTGATCG CCGCGCTCGG CGAGGGGCCG CGTGCGGGGC AGCCGCCGAA TCCGATCAAC
CCTGACGTGA TCGGGAAGCC GCGCGCATGA
|
|---|
| Protein sequence | MQKILVARPI FPDVIERLKQ YFDVDWNDGD ALAPDALAAR LADKDGALTA GDPVGAATLA
AAPRLRVVAN MAVGYNNFDM AAFNAANVLG TNTPDVLNES TADFGWALMM AAARRIAESE
HWLRAGHWQK WAYDGFLGTD IHGSTLGVIG MGRIGQALAR RARGFGMQVI YHNRSRVAPE
IEAELNAEYV SKDALLARAD HVVLVLPYTQ ENHHTIGAAE LAKMKPTATL TNIARGGIVD
DAALAVALRD GTIAAAGLDV YEGEPSVHPA LLEVPNVVLT PHIASATEKT RRAMANLAAD
NLIAALGEGP RAGQPPNPIN PDVIGKPRA
|
|---|
| |