Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_0988 |
Symbol | |
ID | 4448932 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | - |
Start bp | 1095224 |
End bp | 1096780 |
Gene Length | 1557 bp |
Protein Length | 518 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639693014 |
Product | Cl- channel, voltage-gated family protein |
Protein accession | YP_834634 |
Protein GI | 116689011 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0038] Chloride channel protein EriC |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.170879 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCGCGCC CTGCCCTTCC CGCGCTGTTT CCCGCCCTCA CCCGCCGCTC GCTGCGAATC TGGCGCCAAT ACGGAGTTTT CTGGCTCGGT GCGATCGTCG TCGGCCTCGC GGCCGTACTC TACGCCCGGT TGATCGACTG GGGTTACGAG ACTTTCCGCG CGATGCGCGA TCACGCCGTC TGGCTGCCGC TGCTGCTGAC CCCGGCGATC GCCGCGTTGT CGGCATGGAC GACACGTCGC TTTTTCCGCG GCGCCGAGGG CAGCGGCATC CCGCAGGTGA TCGCGACGCT GCATGCCAGC CCGAGCGCAT TCGGCGCCCG GCTGCTGACG CTGCGCATTC TGTTCGGCAA GGTGCTGATC TCGTTCCTCG GCATCCTCGG CGGCTTCACG ATCGGCCGCG AAGGGCCGAC CGTGCAGGTC GGTGCGGCGC TGATGTTCAA CCTGCGACGC TTCTACCCGC GCTCGAACGC GCAGATCGAA CGCCAGCTCG TGCTGGCCGG CGCGGCGGCC GGGCTGTCGG CCGCATTCAA CACGCCGCTC GCGGGCATCG TGTTCGCGAT CGAGGAACTG ACCCGCAGCT TCTCCGCGCG CGCCAGCGGC GTGCTGATCA CCGCGATCAT CCTCGCCGGC GTTGTCGCGC TCGGGCTGAA CGGCAACTAC ACGTATTTCG GCACGATCAA CGCCGGGCTC CATTTCCCGA AGCTGCTGGC GGTCGCGGTG CTGGTCACCG CGATCGTGAC GGGCATCGCG GGCGGCCTGT TCTGCTGGTT GTTGCTGAAT ACGGGGCGCT GGCTGCCCGC GCAACTGCTG GGCCTGTATC GCGAGCGGCC GGTCGCGTTC GCCGCGCTGT GCGGCTTCAC GATCGCCGTC GTCGGGCTCG TGTCCGGCGG CACGACGTTC GGCAGCGGCT ATGCGGAGGC GCGCGGGCTG CTCGACGGCA GTCAGCAGTT GTCGGTGTTC TATCCGCTCC TGAAGATGGT GTCGATGGTC GCGTCGTACC TGCCGGGCAT CCCGGGCGGG ATCTTCGCGC CGTCGCTGTC GATCGGCGCC GGCTTCGGCA ACGTGCTGCA TGCCGTGTTC AGCAACATGA GCCTGCCGAT GCTGATCGCG CTCGCGATGG TCGGCTATCT GGCCGCCGTC ACGCAGGCGC CGATCACGTC GTTCGTGATC GTGATGGAAA TGATCAACGG TCATGCGCTC GTGATTTCGC TGATGGCGAC CGCGCTGGTA TCGAGCCGGG TATCGCGCTT TTTCGCGCCG CCGCTCTACG AAACGCTCGC GCAGCGCTAT CTCGCGCCGC CCGTCGCGGC CGCCGCGCCG GCCGCGGCAA CCGCAGCGGC CGCGGCGGAC AACATGACCG GCGTGACCGA ACCCCAGGAT GCAACCGCGG CCCCCGCCGA TCCGCTCGAC ACGCTGCGCG ACGAAAGCGG TAACGAGCCG GCCGCTGCGG CGGCGGCCGA CAGCGCCGCG GACACGGCGA CGCCGCACGA TGCCGGGCCG GCCGCGACCG ACGCAAACGG CCCGGCGCAA CAGCACGGCC CGCGCGACGC TCAGTAG
|
Protein sequence | MPRPALPALF PALTRRSLRI WRQYGVFWLG AIVVGLAAVL YARLIDWGYE TFRAMRDHAV WLPLLLTPAI AALSAWTTRR FFRGAEGSGI PQVIATLHAS PSAFGARLLT LRILFGKVLI SFLGILGGFT IGREGPTVQV GAALMFNLRR FYPRSNAQIE RQLVLAGAAA GLSAAFNTPL AGIVFAIEEL TRSFSARASG VLITAIILAG VVALGLNGNY TYFGTINAGL HFPKLLAVAV LVTAIVTGIA GGLFCWLLLN TGRWLPAQLL GLYRERPVAF AALCGFTIAV VGLVSGGTTF GSGYAEARGL LDGSQQLSVF YPLLKMVSMV ASYLPGIPGG IFAPSLSIGA GFGNVLHAVF SNMSLPMLIA LAMVGYLAAV TQAPITSFVI VMEMINGHAL VISLMATALV SSRVSRFFAP PLYETLAQRY LAPPVAAAAP AAATAAAAAD NMTGVTEPQD ATAAPADPLD TLRDESGNEP AAAAAADSAA DTATPHDAGP AATDANGPAQ QHGPRDAQ
|
| |