Gene Bcen2424_0821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_0821 
Symbol 
ID4449889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp920871 
End bp922175 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content68% 
IMG OID639692845 
Productfumarylacetoacetase 
Protein accessionYP_834467 
Protein GI116688844 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID[TIGR01266] fumarylacetoacetase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.386558 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGACA CCCAAGACTG GCGCGCGACG CTCGACCCGG CTCGCAAGAG CTGGATCGAC 
ACGGCGAACG ATCCCGCGTG CGATTTCCCG ATCCAGAACC TGCCGTTCGG GATCTTCAGC
GATGCGAAGC AGGGCGTGCG CCGTGCCGGC GTTGCACTGG GCGACCAGAT CGTCGATCTC
GCGGCACTCG CGCGTGCGGG CCTCGTGACG CTGCCGGCCG GCGCCGACGT GTTCGCCGCG
CCGACGCTCA ACGCGTTCAT CGCGCTCGGC CGCGATGCAT GGCGCAGCGT ACGCTCGCAA
CTGTCGGCGC TGTTCTCGCG CGACAACGCG ACGCTGCGTG ACGATGCGGC GCTGCGCGCG
CAGGTACTCG TCGCGCAGCG CGACGCGACG CTGCATCTGC CGGTCGAGAT TCCCGGCTAC
ACCGATTTCT ATTCGTCGAA GGAGCACGCG ACCAACGTCG GCTCGATGTT CCGTGATCCG
AAGAATGCGC TGCTGCCGAA CTGGTCGGAG ATGCCGATCG GCTACAACGG CCGCGCGTCG
TCGGTGGTCG TGAGCGGCAC GCCGGTGCGG CGCCCGAACG GGCAACTGAA GCTGCCCGAC
CAGGAGCGTC CGGTGTTCGG TGCGTGCCGC AAGCTCGACA TCGAACTGGA GACGGGCTTC
ATCGTCGGCA AGGGCAACGC ACTCGGCGAG CCGATCGCGT GCGAGGACGC GGAAGCGCAT
ATCTTCGGGA TGGTGCTGCT GAACGACTGG AGCGCGCGCG ACATCCAGCA GTGGGAATAC
GTGCCGCTCG GGCCGTTCAA CTCGAAGGGC TTCGCGACGA CGATCTCGCC GTGGATCGTC
ACGCTCGACG CGCTCGAACC GTTCCGCGTC GCGCAGCCGG AGCAGTCGCC GCAGCCGCTC
GCGTATCTGC GGCATGCGGG CAAGCATGCG TTCGATATCG CGCTGGAAGT GACGCTGCGC
GCAGAGGGTG CGGCCGAGGC CACGTCGATC TGCCGCACCA ACTTCAAGCA CATGTACTGG
ACGATGGCGC AGCAGCTCGC GCATCACACG GTGGCCGGCT GCAACACGCG CGTGGGCGAC
CTGATGGGTT CGGGCACGAT CAGCGGGCCG ACCAAGGATT CGTTCGGCAG CCTGCTCGAA
CTGACGTGGA ACGGCAAGGA GCCGGTCGCG CTGAACGGCG GCGGCAGCCG CACGTTCATC
GAGGACGGCG ACGAGCTGAC GCTCGCGGGC TGGTGCCAGG GCGAGGGGTA TCGCGTCGGC
TTCGGTACGT GTGCAGGCAA GATTTTGCCG GCACGCAGCG TGTGA
 
Protein sequence
MSDTQDWRAT LDPARKSWID TANDPACDFP IQNLPFGIFS DAKQGVRRAG VALGDQIVDL 
AALARAGLVT LPAGADVFAA PTLNAFIALG RDAWRSVRSQ LSALFSRDNA TLRDDAALRA
QVLVAQRDAT LHLPVEIPGY TDFYSSKEHA TNVGSMFRDP KNALLPNWSE MPIGYNGRAS
SVVVSGTPVR RPNGQLKLPD QERPVFGACR KLDIELETGF IVGKGNALGE PIACEDAEAH
IFGMVLLNDW SARDIQQWEY VPLGPFNSKG FATTISPWIV TLDALEPFRV AQPEQSPQPL
AYLRHAGKHA FDIALEVTLR AEGAAEATSI CRTNFKHMYW TMAQQLAHHT VAGCNTRVGD
LMGSGTISGP TKDSFGSLLE LTWNGKEPVA LNGGGSRTFI EDGDELTLAG WCQGEGYRVG
FGTCAGKILP ARSV