Gene Bcen2424_0799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_0799 
Symbol 
ID4450273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp901425 
End bp901937 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content63% 
IMG OID639692823 
ProductOmpA-like protein 
Protein accessionYP_834445 
Protein GI116688822 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID[TIGR02802] peptidoglycan-associated lipoprotein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00766515 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGTCGA ATAAAGCTCG TCTGGCCCTG GCCGTGATGA TGATCAGCGC GCTCGCAGCG 
TGCAAGTCGG GCGTGAAGCT CGACGACAAG GCAAACAACG CGGGCGCAGT CAGCACGCAG
CCGAGCGCCG ACAACGTCGC GCAAGTGAAC GTCGATCCGC TGAACGATCC GAACAGCCCG
CTCGCGAAGC GCAGCATCTA CTTCGACTTC GACAGCTATT CGGTGAAGGA CGAGTACCAG
CCGCTGATGC AGCAGCACGC GCAGTACCTG AAGAGCCACC CGCAGCGCCA CGTGCTGATC
CAGGGCAACA CCGACGAACG CGGCACGAGC GAGTACAACC TCGCGCTGGG CCAGAAGCGT
GCGGAAGCCG TCCGCCGTGC GATGGCACTG CTCGGCGTGA ACGATTCGCA AATGGAAGCC
GTGAGCCTCG GCAAGGAAAA GCCGCAGGCA ACGGGTCACG ACGAAGCATC GTGGGCGCAG
AACCGTCGCG CCGACCTCGT CTACCAACAG TAA
 
Protein sequence
MMSNKARLAL AVMMISALAA CKSGVKLDDK ANNAGAVSTQ PSADNVAQVN VDPLNDPNSP 
LAKRSIYFDF DSYSVKDEYQ PLMQQHAQYL KSHPQRHVLI QGNTDERGTS EYNLALGQKR
AEAVRRAMAL LGVNDSQMEA VSLGKEKPQA TGHDEASWAQ NRRADLVYQQ