Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_0555 |
Symbol | |
ID | 4450637 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | + |
Start bp | 623950 |
End bp | 625356 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639692578 |
Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase |
Protein accession | YP_834202 |
Protein GI | 116688579 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGATGC TCAGCCTCGG CGAAGCCGCC CGCCTGATTC CCGGCGCCAC CGTCCACGGC GACGCGGGCG TCACGTTCAA CCGCGTGTCG ACCGATAGCC GCACGGTCGG CGCGGGCGAC CTGTTCGTCG CGCTGAAGGG CGAGCGTTTC GATGCGCACG ACTTTCTCGG CGACGTTGCC GCGCGCGGCG CTGCCGCGGC GCTCGTCGCG CACGCGCCGG CGGGCATTGC GATGCCGATG ATCGAAGGCG GCGAAACGCG TGCCGCGCTC GGCGCGCTCG CGCACGGCTG GCGGATGCGA TTCCCGCTGC CGCTCGTCGC GGTGACGGGC AGCAACGGCA AGACGACCGT CAAGGAAATG ATCGCGTCGA TCTTCGCGGC GGCGGTCGGC GCCGACGCAC GGCTCGCGAC GGCCGGCAAC CTGAACAACG ATGTCGGCCT GCCGCTGACG CTGCTGCGCC TGTCGGCCGC GCATCGTCTC GCGGTGATCG AGATCGGCAT GAACCATCCG GGCGAAACCG AAGTCCTCGC GCGCCTCACC GCGCCGACGG TCGCGCTCGT CAACAACGCG CAGCGCGAGC ACCAGGAATT CATGGCGACG GTCGACGCCG TCGCGCTCGA ACATGCGGCC GTGATTCACG CGCTGCCGCC GGACGGCGTC GCGGTGTTCC CGGCCGACGA CGCGTACGCG GGCATCTGGC GCGTCGCGGC GACCGGCAAC CGCATCCTCG ATTTCGCGCT GCACGACGCC GAACGGCAGA ACGACGCACA GGTCGTCGGG CGCATGCACG GCGGCGAACT CGCGATCGAC ACGCCGGCGG GCGCCGTCAC GGTGCGGCTG CGCGCGCTCG GCGAGCACAA CGCGCGGAAC GCGCTGGCCG CGACGGCCGC GGCGCTCGGC GCCGGCGTCG CGCTGTCGGC GATCCGGCAG GGTCTCGAAG CGTTCGAACC GGTCAAGGGC CGGCTGCAGG TGAAGCAGGC GAGCGTCGGC AGCCTCGGGG GCGCGACGGT CGTCGACGAT ACGTACAACG CGAATCCCGA TTCGATGCGT GCCGCGATCG ACGTGCTCGC CGCGCATCCG GCGCCGCGCG TGCTGGTAAT CGGCGACATG GGCGAAGTCG GCGACGAAGG GCCGGCCTTC CATCGCGAGA TCGGCGCGTA CGCGCGCGAA CGCGGGATCG ACGCGCTGTT CGCGCTCGGC GACGCATCGC GCGACGCGTG CACGGCCTAC GGCGACACGG CACGCCATTT CGACGACGTC GGCGCGCTCG TGTCGGCGCT GCTCGCGGCC GGTTACGGCG CGCAGGCAAC GGTGCTCGTG AAGGGCTCGC GGTACATGAA GATGGAGCGC GTGGTCGACG CGCTGACGAA CCAACCCGCG GCGGGCACCG TGCCTGCCGC ACACTGA
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Protein sequence | MTMLSLGEAA RLIPGATVHG DAGVTFNRVS TDSRTVGAGD LFVALKGERF DAHDFLGDVA ARGAAAALVA HAPAGIAMPM IEGGETRAAL GALAHGWRMR FPLPLVAVTG SNGKTTVKEM IASIFAAAVG ADARLATAGN LNNDVGLPLT LLRLSAAHRL AVIEIGMNHP GETEVLARLT APTVALVNNA QREHQEFMAT VDAVALEHAA VIHALPPDGV AVFPADDAYA GIWRVAATGN RILDFALHDA ERQNDAQVVG RMHGGELAID TPAGAVTVRL RALGEHNARN ALAATAAALG AGVALSAIRQ GLEAFEPVKG RLQVKQASVG SLGGATVVDD TYNANPDSMR AAIDVLAAHP APRVLVIGDM GEVGDEGPAF HREIGAYARE RGIDALFALG DASRDACTAY GDTARHFDDV GALVSALLAA GYGAQATVLV KGSRYMKMER VVDALTNQPA AGTVPAAH
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