Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_0469 |
Symbol | |
ID | 4450035 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | + |
Start bp | 520772 |
End bp | 521275 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639692487 |
Product | hypothetical protein |
Protein accession | YP_834116 |
Protein GI | 116688493 |
COG category | [S] Function unknown |
COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
TIGRFAM ID | [TIGR03344] type VI secretion system effector, Hcp1 family |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00000529011 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTACATA TGCACTTGCA GTTTGGTAGT CCCGCGGTGA AGGGCGAGTC CGCGGATAAA GACCACCAAG GCTGGATCGA ACTGAAATCG TGGGATCACT CGATCGTTCA GCCGCGTTCG GCAACCGCAT CGACCGCTGG CGGTCACACG ATGACGCGTT GCGAGCACGG CGACATGATC TTCACGAAGG AAATCGATTC GTCGAGCCCG CTGCTGTATC AGCACGCTTC GGGCGGTACC ACGTTCGACG AAGTGACGGT CCATTTCTCG CGCGCGGACG GTGAAGGCAA GCGCGTGCAG TATCTGGAAG TCAAGCTCAA GTACGTGATC ATCTCGAGCA TCGCGCCGAG CGTTCGCGAG GAAGGTCTGC CGCTCGAGAC GTTCTCGCTG AAGTACGCAG CCGTGCAGTG GAAGCAAACC CAGCAGAAGA TCGGCGGCAA CCAGGGCGGC AACACGCAAG GCGCCTGGAG TCTGACGAAG AACGACAAGA CCTACGCGGT CTAA
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Protein sequence | MLHMHLQFGS PAVKGESADK DHQGWIELKS WDHSIVQPRS ATASTAGGHT MTRCEHGDMI FTKEIDSSSP LLYQHASGGT TFDEVTVHFS RADGEGKRVQ YLEVKLKYVI ISSIAPSVRE EGLPLETFSL KYAAVQWKQT QQKIGGNQGG NTQGAWSLTK NDKTYAV
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