Gene Bcen2424_0466 details

Gene Information

• Locus tag: Bcen2424_0466
• ID: 4449667
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia cenocepacia HI2424
• Kingdom: Bacteria
• Replicon accession: NC_008542
• Strand: +
• Start bp: 517998
• End bp: 518633
• Gene Length: 636 bp
• Protein Length: 211 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 639692484
• Product: TPR repeat-containing protein
• Protein accession: YP_834113
• Protein GI: 116688490

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.00455074
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGACC GTCTGTTCGC AAAACTGTCT GGGGTAGTGG TGGCTTGCGG CGTGATCGCC 
GGCTGTGCGA GCCAGCCTCC CGCGCCGCCG ACTGCGGAAG TGTTCAACAA GTCGCTGGCC 
GATGCGGACG CCGTCGCGAA GGCGGGGGAC CAGGACAAGG CGCTCGGCCT GTACCAGCAA 
CTCGCGAAGT CCGATCCGAC GCGCGAGGAA CCGTGGTCGC GCATCGCGCA AATCCAGTTC 
GCGCAAAACC ATTACGGGCA GGCGATCGTC GCCGCCCAGG AAGCGCTGCA GCGCGACGCG 
ACCGATCGTC AGGCGAAGAG CGTGCTGGCC GTCGCCGGCC TGCGGATCGC GACGCAGTCG 
CTCGGCGAGC TGCGCCAGGA CGCATCGCTC GCGGGCGATG CGAAGTCTGA CGCGCAGGCG 
CTCGCGAAGC AACTGCGCGA TACGCTCGGC GAATCGGCGC TGTTTCCGCC GGAAACCAAG 
ACCGTGAAAC CGCGCCCGCC GCGCCGCGTC GTCCATCGCC CGAAGGGCGG GGCCGCACCG 
GCTGCCGATG CGGCTGCGCC GGCCGCACCG AGCGCGCCGA CGCCGCCTGT GGCGCAAAAG 
GGCAGCGCGG ACCCGTTCGG CGCACTGCGC AACTGA 

 

Protein sequence

MKDRLFAKLS GVVVACGVIA GCASQPPAPP TAEVFNKSLA DADAVAKAGD QDKALGLYQQ 
LAKSDPTREE PWSRIAQIQF AQNHYGQAIV AAQEALQRDA TDRQAKSVLA VAGLRIATQS 
LGELRQDASL AGDAKSDAQA LAKQLRDTLG ESALFPPETK TVKPRPPRRV VHRPKGGAAP 
AADAAAPAAP SAPTPPVAQK GSADPFGALR N