Gene Bcen2424_0395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_0395 
Symbol 
ID4448117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp441197 
End bp442528 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content65% 
IMG OID639692412 
Productglycerol-3-phosphate transporter periplasmic binding protein 
Protein accessionYP_834042 
Protein GI116688419 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.954301 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAGC CTGCGGGGAC ACTGGTTCGT TCGATCGCGC TCGGCGGCGC GCTGATATTC 
GGGGTACAGC ACGTGGCGCT CGCCGCGACG GAAATCCAGT TCTGGCATGC GATGGAGGCC
GCGCTCGGCG AGCGGGTCAA TGCGATCGCC GATCAGTTCA ACGCGTCGCA AAGCGATTAC
AAGATCGTGC CGGTCTACAA GGGCACCTAC GACCAGGCGC TCGCAGCGGG CATCGCGGCC
TATCGCAGCG GCAACGCGCC GGCGATCCTC CAGGTCTATG AAGTCGGCAC GGCGACGATG
ATGCAGGCGA AGAAGGCGGT CGTGCCGGTC TACGACGTGT TCAAGCAGGC GGGCGTGACG
CTCGACGAAA AGGCGTTCGT GCCGACCATC GCGAGCTACT ACAGCGACGC GAAGACGGGC
CACCTCGTGT CGATGCCGTT CAACAGCTCG ACGCCGGTGC TGTACTACAA CAAGGACGCG
TTCAAGAAGG CGGGCCTCGA TCCGAACCAG CCGCCGAAGA CGTGGGCCGA CGTGAAAGCG
GATGCCGAGA AGCTGCGCAA ATCCGGGATG GCCTGCGGCT TCACGACCGG CTGGCAAGGC
TGGATCCAGC TCGAAAACTA CAGCGCGTGG CACGGGCTGC CGTTCGCGAG CCGCAACAAC
GGCTTCGACG GCACCGACGC CGTGCTCGAG TTCAACAAGC CGCAGCAAAT CGAACACATC
TCCTTCCTCC AGCAGATGGC GAAGGACGGC ACGTTCACGT ACGCGGGCCG CAAGGACGAA
GCGTCGGCGA AGTTCTACAG CGGCGACTGC GGGATCCTCA CGACGTCGTC GGGCGCGCTC
GCGAACGTGC AGAAATTCGC GAAGTTCAGC TACGGCACGG GCATGCTGCC GTACGACGCG
AACGTGAAGG GCGCGCCGCA GAACGCGATC ATCGGCGGCG CGAGCCTGTG GGTGCTGGCC
GGCAAGGACC CGGCGACCTA CAAGGGCGTC GCGAAATTCC TCTCTTACCT GGCTTCGCCC
GCGGTCGCCG CGAAGTGGCA CCAGGACACC GGCTACCTGC CGGTCACGAC CGCCGCGTAC
GACCTGACGC GCCAGCAGGG CTTCTACGCG AAGAACCCGA GCGCCGAAAC CGCGATCAAG
CAGATGCTGA ACAAGCCGCC GCTGCCGTAC ACGAAGGGGC TGCGCCTGGG CAACATGCCG
CAGATCCGCA CGGTGGTCGA CGAGGAGTTC GAACAGGTCT GGGCGCAGAA GAAGTCGCCG
AAGGACGCGC TCGATTCGGC TGCGTCGCGC GGCGACGAAC TGCTGCGCCG CTTCGAGAAG
TCGGGCGGCT GA
 
Protein sequence
MKKPAGTLVR SIALGGALIF GVQHVALAAT EIQFWHAMEA ALGERVNAIA DQFNASQSDY 
KIVPVYKGTY DQALAAGIAA YRSGNAPAIL QVYEVGTATM MQAKKAVVPV YDVFKQAGVT
LDEKAFVPTI ASYYSDAKTG HLVSMPFNSS TPVLYYNKDA FKKAGLDPNQ PPKTWADVKA
DAEKLRKSGM ACGFTTGWQG WIQLENYSAW HGLPFASRNN GFDGTDAVLE FNKPQQIEHI
SFLQQMAKDG TFTYAGRKDE ASAKFYSGDC GILTTSSGAL ANVQKFAKFS YGTGMLPYDA
NVKGAPQNAI IGGASLWVLA GKDPATYKGV AKFLSYLASP AVAAKWHQDT GYLPVTTAAY
DLTRQQGFYA KNPSAETAIK QMLNKPPLPY TKGLRLGNMP QIRTVVDEEF EQVWAQKKSP
KDALDSAASR GDELLRRFEK SGG