Gene Bcen2424_0258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_0258 
Symbol 
ID4447952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp297951 
End bp299930 
Gene Length1980 bp 
Protein Length659 aa 
Translation table11 
GC content72% 
IMG OID639692266 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_833905 
Protein GI116688282 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00414638 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGCATA ACTGGTCGAT CCGCACGACG CTCACGGCGG TCGGACTCAT CCTCGTGTGC 
CTGGCCGCCG CGGTCGGCGG GCTCGGCCTT TACGCGCTGA ATCACGCGAG CCGTTCGCTC
GACGAGATCG CGCACGTCGA CCTGCCGGCG ATCCACACGC TGGACGACAC GGCCGCGTAC
CTGCTGCGCT CGCGCGTCGC GCTCGATCGC TTTCGTACGC TGACCGAAGC CGGCAATGCG
GCCGACGCGG CGAAGGTGCT CGACCGCGCG CAGGAGCTGT ATGCGAAGTC GAACCAGAAC
TGGCAGACGT TCCAGTCGAC GCCGAAGCTC GGCGTCGAGC AGGCGCTCGT CGACGAGCTC
ACCGCGCGTT ACGCGACGAT CATGAAGGAA GGCGTCGAAC CGGAATTCGC CGCGGCGCGC
GCGGGCGACA TGGCCGCGTA CCACGCGATC GCCGACGCGA AGATCAGCCC GATGTTCGTC
GCGTTCGACC AGACGGCGGC GGCCGTGATC GCCGCGCTGC AAAAGCGCGC GGAAGAACGC
CAGGCCGCGA CGCAGTCGCA GATCTCGATG ATGATCGCGC TGATCGCGGC CGGCATCGCG
CTCGCGTTCG TCGTCGTGAT CGCGATCCGC TTCGTTCTGC GCGGGCTGAT CGTCCAGCCG
ATCGAGGACG CGATCGCGCA CTTCGAGCGC ATCGCCGGCG GCGATCTCAC GCAACCGGTG
AGCGTGTTCA GCACGAACGA GATCGGCCGC CTGTTCGGCG GCATCAAGCG GATGCAGGAC
GCCGTCACGA CGATGGTGCA GGCCGTGCAT CGCGGCACCG AATCGATCGA CGTCGGCGCG
CGCGAGATCG CGAGCGGCAA CATCGACCTG TCGCAGCGCA CCGAGGAGCA GGCCGCCTCG
CTGCAGGAAA CCGCATCGAG CATGGAGCAG CTGACGGGCA CCGTGCGGCA GAACGCGGAA
AACGCGCGGC AGGCGAGCCA GCTCGCGGTG AACGCGTCGG ACATCGCGAC GCAGGGCGGC
GACGTGGTCG GCCAGGTCGT GTCGACGATG CAGGACATCG CGGCGAGCTC GGGCAAGGTC
GTCGACATCA TCGGCACGAT CGAGGGCATC GCGTTCCAGA CCAACATCCT CGCGCTGAAC
GCGGCCGTCG AAGCGGCGCG GGCCGGCGAG CAGGGCCGCG GCTTCGCGGT GGTCGCGGGC
GAGGTGCGTT CGCTCGCGCA GCGCAGCGCG AGCGCCGCGA AGGAAATCAA GCAGTTGATC
GGCGATTCGG CCGAGAAGGT CGACAGCGGG TCGGCGCTCG TCGCGCGCGC CGGCGCGACG
ATGGACGAGA TCGTGCAGGC GGTGCGCCGC GTGACCGACA TCATGGGCGA GATCAGCGCG
GCCTCCGACG AGCAGTCGAC CGGCATCGAG CAGGTCAACC GTGCGGTCGG CCAGATGGAT
GCGGTCACGC AGCAGAACGC GGCGCTCGTC GAGCAGGCGG CCGCCGCGGC CGCGTCGCTC
GAGGAGCAGA CGCGCCAGAT GAAGGCGATC GTGTCGGGCT GGCGCGTCGC GGGCGGCATC
GCGCTCGCGC CGACGCGCGG CGTCGCGCGG CCGGTGGCCC ACGAACCGGC GGCGCTGCCG
TCGGACGTGC GCCACGACGC GCCGGTCGCC GCGCTGCCGG CGCCGGCAGC GGCTCAACCG
GCCGCACGGC GCGGCGCGCC GGCATCGCGT GCCGCTGCCC CCGCAACTGC GGGCGCGGGC
GCCGCGGCAG CGGCCGCCGA ACCGAAGCGT GCGGCCGATG CGGCCGCGCG CACGCAGAAG
GACGCACCGG CTGCCCGTGG CGGTACCGCC GCGGGCGGCT ACGGCCCGCG TCTCGCGAAG
ACGGCCGCCG CGGCGGACAA GCCGGCCGCG AAGCCCGCGC TCGTGCGCCC GGCGCTGAAC
GGCGAGAAGC CGGCGCTGGC CGCCGCCGGC GCGTCGGACG ACGACTGGGA GACCTTCTAA
 
Protein sequence
MLHNWSIRTT LTAVGLILVC LAAAVGGLGL YALNHASRSL DEIAHVDLPA IHTLDDTAAY 
LLRSRVALDR FRTLTEAGNA ADAAKVLDRA QELYAKSNQN WQTFQSTPKL GVEQALVDEL
TARYATIMKE GVEPEFAAAR AGDMAAYHAI ADAKISPMFV AFDQTAAAVI AALQKRAEER
QAATQSQISM MIALIAAGIA LAFVVVIAIR FVLRGLIVQP IEDAIAHFER IAGGDLTQPV
SVFSTNEIGR LFGGIKRMQD AVTTMVQAVH RGTESIDVGA REIASGNIDL SQRTEEQAAS
LQETASSMEQ LTGTVRQNAE NARQASQLAV NASDIATQGG DVVGQVVSTM QDIAASSGKV
VDIIGTIEGI AFQTNILALN AAVEAARAGE QGRGFAVVAG EVRSLAQRSA SAAKEIKQLI
GDSAEKVDSG SALVARAGAT MDEIVQAVRR VTDIMGEISA ASDEQSTGIE QVNRAVGQMD
AVTQQNAALV EQAAAAAASL EEQTRQMKAI VSGWRVAGGI ALAPTRGVAR PVAHEPAALP
SDVRHDAPVA ALPAPAAAQP AARRGAPASR AAAPATAGAG AAAAAAEPKR AADAAARTQK
DAPAARGGTA AGGYGPRLAK TAAAADKPAA KPALVRPALN GEKPALAAAG ASDDDWETF