Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_0066 |
Symbol | mnmC |
ID | 4448773 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | + |
Start bp | 67230 |
End bp | 69161 |
Gene Length | 1932 bp |
Protein Length | 643 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639692073 |
Product | 5-methylaminomethyl-2-thiouridine methyltransferase |
Protein accession | YP_833713 |
Protein GI | 116688090 |
COG category | [E] Amino acid transport and metabolism [S] Function unknown |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) [COG4121] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR03197] tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCGACC GACTTGTTTC CGCCACGCTC GCGCTTCGCG ACGACGGCAC GCTCGTCTCG CCCGAGTTCG GCGAGCTTCA TCGCGGTGCA TCCGGCACGC TCGCTCGCGC GCATCGCACG TTCGTCGCGG GCAACGGGCT GCCCGCGCGC TGGCAGCGCC GCCGAACGTT CACGATCGTC ACGACCGCGT TCGGCGCGGG CGCCGGCTTC CTCGCGGCCT GGGCCGCGTG GCGCGACGAT CCCGCGCGCT GCGAACGGCT GCACGTCGTC GCGGTCGAAC CGCATCCGTT CTCGCGCGAC GACCTGCACC GCGCGGTCTC GCATATGGTT GTAGACACAA CCATATCGGC AGACGTCGAC GCGTTGCTCG ATGCCTGGCC GATACTCGTG CCGGGCCTGC ACCGGCTCGA ATTCGACGAA GGGCGCGTGG TGCTCACGCT CGCGTTCGGC GATACGATCG ACTTGTTGAA GAAGCTCGTC GCGCGCGCCG ATGCGTTTTT TCTCGACGGC GCCGCGGCAT CGGGCGACGG GATTCGCGCA CTCGCGAAAC TCGCCGGCGA ACACGCGACG TTTGCGACGC ATGCAAAGTC CGACGACGTG AAACACGCGC TCGGCGAAAC AGGTTTCACG TTCCGCGAAG TCGACGATCG CCTCGTCGGC GACTATGCGC CGCGCTGGCG CGCGCGCCGG CACGAGCCGC CGCGTGCGCT GCCCGTTGCC GCGCGCCGCG CGATCGTGAT CGGCGCGGGT CTCGCCGGCT GCGCGGTGGT CGAACGGCTG GCCGCGCGCG GCTGGGACGT CACGCTGATC GAACGGCACG AACGGATCGC GAGCGAAGCG TCGGGCAATC CGGCCGGTGT GTTCCATCCA TTGATGACGC GCGATGACAA CGTCGCGAGC CGGCTCACGC GCGGCGGCTT CCTGCACGCG CTCGCACGCT GGCGTGCGCT CGAACGCGCG GGGCATGCAT TCTCACGCAG CACGCACGGG ATGCTCCATC TCGCCGAATC GGCCGACGAT TTCGCGCGGA TGCGCGACGC GTTCGACGCG TTCGGGCCGC CGTCCGACTA TGCAACGCTG CTCGATGCCG ATGCCGCGCG GGCGCACCTG AATCTGCCGG TCGCGCAGGG CGGCCTGCTG TTTCCGCACG GCGGCGCCGT GTGGCCGGCC GGGCTGTGCG TCGCGCAGTA TGCGGCGGCC GGCGAGCGCG TGCGGCTGCT GGCGTCCACC TGCGTCGCAC GGCTCGAACG GCGGGACGAC ACCTGGCATG CACTCGACGA TACCGGCGCC ACGCTGGCCG ATGCGCCCGT CGTCGTGCTC GCGAACGCGG GCGACGCCGC GCGTCTTGCC GGGCTGCGGC ACGTCACGCT GCAACCGGTG CGCGGCCAGC TCACGCTGTT GCCGCCGGGC ACGACGGCGC CGCTGCCGTG CCCGGCGATC GGCGACGGTT ACGCGGTCCC GCTCGACGAC GGCACGCTGC TGATCGGCGC CACCTTCGAA CCGGACGACA CCGATCCCGC GATGCGCGCG GCCGGCCACG CCGAAAACCT CGATCGCGTG CGGCACCTGC TGCCGGGCCT GATCGGCGCG CTGCCGGATC CCGCCACGCT GCGCGGGCGC GTCGCATTCC GCTGGGTCGT CGGCGACCGC CTGCCGCTCA TCGGCCCGCT CGCCGACGAA ACGCAGGCCA CCGCGAACGC ACGCGCGCTG GGCGGTGCGC AGGCGCGCGA CCTGCCGCGC ATGCCGGGCC TCTACGGCGC CTTCGGCTTC GGTTCGCGCG GCCTCGTGTG GGCCGCGCTC GGCGCCGAAC TCATCGCATC GCAACTCGAA GGCGAGCCCT GGCCGCTCGA GCGCGAACTC GCCGACGCCG TCGATCCCGC CCGCTTCCTG ATCCGCGCAC TGCGCGCCCG CCGCGTCGGC TCGGCGGGCT GA
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Protein sequence | MPDRLVSATL ALRDDGTLVS PEFGELHRGA SGTLARAHRT FVAGNGLPAR WQRRRTFTIV TTAFGAGAGF LAAWAAWRDD PARCERLHVV AVEPHPFSRD DLHRAVSHMV VDTTISADVD ALLDAWPILV PGLHRLEFDE GRVVLTLAFG DTIDLLKKLV ARADAFFLDG AAASGDGIRA LAKLAGEHAT FATHAKSDDV KHALGETGFT FREVDDRLVG DYAPRWRARR HEPPRALPVA ARRAIVIGAG LAGCAVVERL AARGWDVTLI ERHERIASEA SGNPAGVFHP LMTRDDNVAS RLTRGGFLHA LARWRALERA GHAFSRSTHG MLHLAESADD FARMRDAFDA FGPPSDYATL LDADAARAHL NLPVAQGGLL FPHGGAVWPA GLCVAQYAAA GERVRLLAST CVARLERRDD TWHALDDTGA TLADAPVVVL ANAGDAARLA GLRHVTLQPV RGQLTLLPPG TTAPLPCPAI GDGYAVPLDD GTLLIGATFE PDDTDPAMRA AGHAENLDRV RHLLPGLIGA LPDPATLRGR VAFRWVVGDR LPLIGPLADE TQATANARAL GGAQARDLPR MPGLYGAFGF GSRGLVWAAL GAELIASQLE GEPWPLEREL ADAVDPARFL IRALRARRVG SAG
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