Gene Bcen2424_0054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_0054 
Symbol 
ID4448761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp55185 
End bp56294 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content70% 
IMG OID639692061 
Productgeneral secretion pathway protein K 
Protein accessionYP_833701 
Protein GI116688078 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3156] Type II secretory pathway, component PulK 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.117159 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGCGC GCCCTTTCCG TCGAATGCCT GCCCGCCGCC AGCGCGGCGC CGCGATCATC 
ACCGCGCTGC TCGTGGTCGC GCTGTCGGCG ATCCTCGTGT CGGGGATGCT GTGGCGCCAG
CAGGTGCAGA TCCGCCGCAT CGAGAACCAG CGCGTGATCG CGCAGGCGCA GTGGGTCGCG
CGCGGTGCGC TCGACTGGAC CCGGATGATC CTGCGCTCCG AAGGCGACAC GGCGCCCGGC
ATCACCTATC TCGGCGGAAT CTGGGGCGTG CCGATTGCGA AGACGAAGCT GTCGGATTTC
CTCGGCCGGA TCGGCGCGCC CAACGAAACG GGCGGCGGCG ACACTTACCT CTCCGGCTCG
ATCGAGGACG CGCAGGCGAA GTTCAACCTG CGCAACCTCG TGTCGTCGCC GGCGCCCGGC
GTGCTGCAAC TGAACGTCAC GCAGATGCAG GCGTTCCAGC GCCTGCTGAC GACGCTCGGC
TACGACAGCG CGTTCGCGAA GCGCATCGCG CTGCAGGTGC GCGCGGGCCT GCTGCATTCG
GCCACGCGGT TCCAGATGCC GAACCTGCCC GGCGGCGGCG GGACCGCCGC GAACGCCGCG
ACCGCGCCGG TGACGAGCGG CGACATGCAG GGCAGCGGCT TCACCGACGA TCCCGGCATG
GCCGGCGGCG ACCGCGGACC CGCGCCGCTG ATGATGACGC GCGTCGACAG CCTGCTCGAC
GTCGACGGCG TGACGCCGGA GATGGTCGCG CGGCTGCGCC CGTTCGTCAC GGTGCTGCCG
ACCACCACGC CCGTGAACAT GAACACCGCA CCGGCCGAAG TGATCGCCGC GCTGATACCG
GGGATGAGCG TGTCGTCCGC GCAGGCGCTC GTGTCGCGCC GCGAGACCGT GTTTTTCCGC
AACGTGGGCG ACGTGCAGCT CGCGCTGCGC GGCGCCGGCG CGCCGCCGAA CGTGACGATC
GACTCGAGCC TCGTCGACGT CAATTCGAGC TATTTCATCG TGCATGGCCG GATTCAGCAC
GAACGCGCGG AGGTCGACCG CACCTCGCTC GTGTATCGTG ATCCGACCAC GCACTCGACG
CGGGTCGTGC GCATCCGCGA CCAGCTATAA
 
Protein sequence
MRARPFRRMP ARRQRGAAII TALLVVALSA ILVSGMLWRQ QVQIRRIENQ RVIAQAQWVA 
RGALDWTRMI LRSEGDTAPG ITYLGGIWGV PIAKTKLSDF LGRIGAPNET GGGDTYLSGS
IEDAQAKFNL RNLVSSPAPG VLQLNVTQMQ AFQRLLTTLG YDSAFAKRIA LQVRAGLLHS
ATRFQMPNLP GGGGTAANAA TAPVTSGDMQ GSGFTDDPGM AGGDRGPAPL MMTRVDSLLD
VDGVTPEMVA RLRPFVTVLP TTTPVNMNTA PAEVIAALIP GMSVSSAQAL VSRRETVFFR
NVGDVQLALR GAGAPPNVTI DSSLVDVNSS YFIVHGRIQH ERAEVDRTSL VYRDPTTHST
RVVRIRDQL