Gene Bcen2424_0011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_0011 
Symbol 
ID4451108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp17431 
End bp17952 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content67% 
IMG OID639692017 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_833658 
Protein GI116688035 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0275679 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCTCCA CCGCCCTCGA CGACGAAGCA TTGCGCGAAC TCATCCCCAG GCTGCGACGC 
TTCGCACTCT GGCTGGCGCG CGACGTCCAC GCGGCCGACG ATCTCGTCCA GTCGACGCTC
GAGCGCGCAC TGTCGCGCTG GACGAGCCGT CGCGACGACG CATCGCTGCG CAGCTGGCTC
TTCACCATCC TGTACCGGCA ATTTCTCGAC GGCAAACGCA GCGCGAAGCG CTACAGCTGG
CTGCTCGGCC GCATTCGCGA CGACGACGAA GCGCACTGGC CGTCCGCCGA ACGCGAATTC
GCGGCGCGCG CGACGCTCGA AGCGTTCGGC CGGCTCTCGG ACGAACAGCG AAGCCTGCTG
CTGCTCGTCG CGGTCGAAGG CTTCACCTAT CAGGAAGTCG CCGACCTGCT CGAGGTGCCG
ATCGGCACGG TGATGTCGCG GCTCTCCCGC GCGCGCCAGG CGCTGCGCCA GCTCAGCGAC
GGCGAACTTC CTGCTCCTTC CTTGCGGCTG ATGAAGAAAT GA
 
Protein sequence
MPSTALDDEA LRELIPRLRR FALWLARDVH AADDLVQSTL ERALSRWTSR RDDASLRSWL 
FTILYRQFLD GKRSAKRYSW LLGRIRDDDE AHWPSAEREF AARATLEAFG RLSDEQRSLL
LLVAVEGFTY QEVADLLEVP IGTVMSRLSR ARQALRQLSD GELPAPSLRL MKK