Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_4184 |
Symbol | |
ID | 7858112 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 4612721 |
End bp | 4613488 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 643868284 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_002884184 |
Protein GI | 229822658 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGCGG CCGGTCGGGT CGCCGTCGTC ACCGGTGGCG CCACGGGCAT CGGTCGCGCG ACATGCCTGG AGCTGGCGCG GCGCGGCATC GAGGAGATCC ACGTCGGGTA CTCCCGGTCG GCGCAGGCGG CCGAGGACCT CGCCGCCGAG CTGCGCGGGA TGGGCGCCGT CGCGCACCCG CTCCTCCTCG ACGTGTCCGA CCGCGACGCC GTCGGCCGGG CCGCGGCCCA CGTGCTGGAG ACGAGCGGCG GCCTGGACGT GCTCGTGAAC AGCGCGGGGA CGACCGAGAA GATCGAGTTC GCGGACCTCG ACGCCGTGAC CCCCGAGCTC TGGGACGAGC TCCTCGGCGT CAACCTCGTC GGCGCGTTCT GGGTGTGCCA GGCGTTCGCC GAGTCGATGA GGCGCCGCGG CGGCTCGATC GTCAACGTCA CGTCCATCGC GGGGACGCGC GCCGTCGGCA GCTCGCTGCC GTACGGCGTC AGCAAGGCGG CCCTGGCGCA GCTGACCCGC GGGCTCGCCG TCGCGCTCGC TCCCGCCGTG CGGGTCAACG CCGTCGCACC CGGCACCGTG ATCTCGGGCT GGCACGAGCG ACTGGTCGGC GCCGAGGCAG CACGGAGGAC CTTCGACGCC GAGGCGGACC TCGTCCCGCT GGGGCGGCTC GCCGATGCCG ACGACATCGG CCACGCGATC GTGACGGTCG CGCTCGACCT GCCGTTCGTC ACGGGCCAGG AAGTCCTCGT CGACGGCGGC AAGGCGCTGC GCTACTGA
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Protein sequence | MSAAGRVAVV TGGATGIGRA TCLELARRGI EEIHVGYSRS AQAAEDLAAE LRGMGAVAHP LLLDVSDRDA VGRAAAHVLE TSGGLDVLVN SAGTTEKIEF ADLDAVTPEL WDELLGVNLV GAFWVCQAFA ESMRRRGGSI VNVTSIAGTR AVGSSLPYGV SKAALAQLTR GLAVALAPAV RVNAVAPGTV ISGWHERLVG AEAARRTFDA EADLVPLGRL ADADDIGHAI VTVALDLPFV TGQEVLVDGG KALRY
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