Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_4032 |
Symbol | |
ID | 7861130 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 4458109 |
End bp | 4460859 |
Gene Length | 2751 bp |
Protein Length | 916 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 643868135 |
Product | integral membrane protein |
Protein accession | YP_002884035 |
Protein GI | 229822509 |
COG category | [S] Function unknown |
COG ID | [COG0392] Predicted integral membrane protein |
TIGRFAM ID | [TIGR00374] conserved hypothetical protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGAGG CGGACGCGCC GGGCACCACG GTGCCCCAGG CGCCGGCACC GTCGGTGCCC CCGCCGACGC GCACGGTCGA GATCATCGAC GTGCCCGCGC ACCGGCTGCG CCGGCCCGGT GACCTGGTGG CGATGATCCT GGCGCTGCTC GGCGTCGTCC TCGTCCTGCT CCTCGCCGTG TACGCGCACC GCACCACCGA GGGCGTGACG GAGGACATCG AGAACGCCCT CCCTGACTTC CTGGAACGTC TTCTCGACAT CCCGCTGAAC CTCCTCGAGG GTCTCGTCAC GTTCCTGCTG CCGCTCCTCG TCATCGTCGA GCGGCTGATC CGGCGCCAGG TCCGCGTGGT CCTCGAGGCG CTCGCGGCCG CAGTCGTCGC GGCGTTGCTG ACCGGCGCCG GCGCGTGGCT GCTCAGGTCG TTCGCGCCGG ACGCGCTCGT CGACGGCCTC GCGATCGCCT CCGGCACAGC GCTGTCGCCG GCGGTCGCCG CGATCGCCGC CCTGCTCACC ACGATCGGCT CGCGCGACCG GCGCCGCGCG GTCGGGTGGT CGTGGAACCT GCTCTGGATC GTCCTCGTGC TCCAGGTGCT CATGGGCGCG ATGTCCCTGC CCGGGGCCTT GGTCTCGGTG CTTCTCGGCC GCGCGCTGGG CCTGGCCGCC CGGTACCTGT GGGGCGTGCG CGGGGAGCGC GCGTATGGTC GCGACCTGGT CACCGCCATC CGCCGGGCCG GGCTCGATCC CTTGCGGATC CAGCGGATCG CTGATCCCGA GGACCTCGCC GAGGCCACCG CCGAGCTCGT GACGACCAAC TCACCGATCG GCTACGTCAC CGAGCACCCG GACGCGCTGC CGGCCCGTGC GGAGCGGCGG GCGGAGATCC GTGAGGAGCG AGGGGCGGAC GACGACGGCG CGCCGCCGAC GTCGTCACCG GCCTTCATGG CGGCCACGTC GGAGCAGGCC GACGACGGCG AACCCGCGCC GTTCTCGTCG CCCACCCCGG TCGTCACGCT CGACGACGAG AGCGCGCCCG CCGACGCCGG ACCTCCCGCC CCGATTCGCC TCCGGGTGAG CGACCCGGCC ACGGTGGCGC TCGCGCGCGA GGGCGAGAAC CGCGTGTACG CCGTCGTCGA CGCCGACGGC ACCCGGTGGG ACGTGGTGGT GCTCGACGGC GACCGGCAGG TGGTCGGCAC GCTCGCCGCG TTCTGGTCGA CGATCCGGCT CAAGGGCCTC GAGCAGCGAG CCGTGGTGTC GCTGCGGGCG GCCGCGGCGC GCGCGGCCCT CATGACGTAC GCGGCGGCCG CCGCGGGGGT GCGGGCGCCC AGGCTGCAGG GCATCGCGGA CGAGGAGGAC TCGGTGCTGC TCGTCGGGGA GCACGTGTCC TCGGCCACGA CCCTGTCCGC GATGCAGCCG GACGACATCA CCGACGAGCT GCTCGACGGC GCCTGGGAGC AGCTGCGGGT GGCGCACGAC GCCGGTCTGG CGCACCGGGC GATCACCGGC GACGCGATCC TCGTGGCCAG CGGGCGCGAC GTGTGGCTCA CCGCCTGGGA GAACGGCGAG ATCGCGGCGT CCGAGCTCGC CCGCCGGCTG GATCTCGCGC AGATGCTCGC GCTCCTGGCG CTCACCGTCG GGCCCGAACG GGCCATGGCG AGCGCCTCGC GCTCCCTCAC GGAGGAGCAG CTCGTCGCGA TCGCACCCAT CCTGCAGCCG GTGGCCCTGC CGCCCGCCAC CCGGGCGGCG GCGCGCCGCG ACAAGCAGGT GCTCGCGCGC GTCCAGAACC TGCTCGTCGA CCTCATCCCG ACGGCGCAGA CGGAACCGAT GCAGCTCGCC CGGTTCAGCG CCCGGACGGT CGTCACGGTC ACCGTCGCCG TCATCGCCGG CTTCATCCTG CTGACCACGC TGAACTTCGA CCAGATCATC GCCGCGGTGC GCGAGGCGAA CCCGGTGTGG ATGGTCGTGG CGTTCCTGCT GGGACTCCTC ACCTACCTCG GCTCCGCGAT GAGCCTCGTC GCGTTCTCCC CCGAGAAGCT CCCCCTCTGG CGCACCACGC TCGTGCAGGT GGCGGCGTCC GTCATCACGC TCGTGGCTCC CGCGGGGATC GGGCCGGCCG CCCTCAACCT GCGGTACCTG CAGAAGAACC GCATCGCGAC CCCGATGGCG CTCGCGACGG TGGCGCTCGT GCAGGTGTCG CAGTTCGTCA CCACCGTCCT GCTGCTCCTG GTGATCGCTC TCGTCACCGG CTCGTCGGGC GCCCTGGACT CGTTGCCGTC CGGGGCCGTG CTGCTCGTCG TCGCTCTCGT GCTCGTGGCC GCGTCGACGG CGTTCGCGTT CCCGGCGGTG CGCCGCTGGG TGCTCGCCCG GCTGGTGCCG ATGCTGCGCC AGGTGTGGCC GCGCGTCGTG TGGGTCGTCG GGCAGCCCGG ACGGCTCGCG ATGGGGATCG GCGGCAACCT CATCATGACC ATCGGCTACC TCGCGGCGTT CCAGGCGGCG CTCGAGGCGT TCGCTCAGAG CGTCCCGCTC ACGTCGCTGG CGATCATCTA CCTCGTCGGG ACGGCGGCGG GCTCCGCGAT CCCGACACCC GGGGGCGTCG GGACCGTCGA GCTCGCGCTC ACGTCCGGCC TGCGGACGGC GGGCGTGCCG ACGGCGGTGG CGGCGTCGTC GGCGGTCCTC TTCCGCGTGC TGACGTTCTG GGGCCGCGTG CCCCTCGGCT GGCTCGCGAT GCGGTACCTG CAGAAGCGCG ACGCGATCTG A
|
Protein sequence | MSEADAPGTT VPQAPAPSVP PPTRTVEIID VPAHRLRRPG DLVAMILALL GVVLVLLLAV YAHRTTEGVT EDIENALPDF LERLLDIPLN LLEGLVTFLL PLLVIVERLI RRQVRVVLEA LAAAVVAALL TGAGAWLLRS FAPDALVDGL AIASGTALSP AVAAIAALLT TIGSRDRRRA VGWSWNLLWI VLVLQVLMGA MSLPGALVSV LLGRALGLAA RYLWGVRGER AYGRDLVTAI RRAGLDPLRI QRIADPEDLA EATAELVTTN SPIGYVTEHP DALPARAERR AEIREERGAD DDGAPPTSSP AFMAATSEQA DDGEPAPFSS PTPVVTLDDE SAPADAGPPA PIRLRVSDPA TVALAREGEN RVYAVVDADG TRWDVVVLDG DRQVVGTLAA FWSTIRLKGL EQRAVVSLRA AAARAALMTY AAAAAGVRAP RLQGIADEED SVLLVGEHVS SATTLSAMQP DDITDELLDG AWEQLRVAHD AGLAHRAITG DAILVASGRD VWLTAWENGE IAASELARRL DLAQMLALLA LTVGPERAMA SASRSLTEEQ LVAIAPILQP VALPPATRAA ARRDKQVLAR VQNLLVDLIP TAQTEPMQLA RFSARTVVTV TVAVIAGFIL LTTLNFDQII AAVREANPVW MVVAFLLGLL TYLGSAMSLV AFSPEKLPLW RTTLVQVAAS VITLVAPAGI GPAALNLRYL QKNRIATPMA LATVALVQVS QFVTTVLLLL VIALVTGSSG ALDSLPSGAV LLVVALVLVA ASTAFAFPAV RRWVLARLVP MLRQVWPRVV WVVGQPGRLA MGIGGNLIMT IGYLAAFQAA LEAFAQSVPL TSLAIIYLVG TAAGSAIPTP GGVGTVELAL TSGLRTAGVP TAVAASSAVL FRVLTFWGRV PLGWLAMRYL QKRDAI
|
| |