Gene Bcav_4032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_4032 
Symbol 
ID7861130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4458109 
End bp4460859 
Gene Length2751 bp 
Protein Length916 aa 
Translation table11 
GC content74% 
IMG OID643868135 
Productintegral membrane protein 
Protein accessionYP_002884035 
Protein GI229822509 
COG category[S] Function unknown 
COG ID[COG0392] Predicted integral membrane protein 
TIGRFAM ID[TIGR00374] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGG CGGACGCGCC GGGCACCACG GTGCCCCAGG CGCCGGCACC GTCGGTGCCC 
CCGCCGACGC GCACGGTCGA GATCATCGAC GTGCCCGCGC ACCGGCTGCG CCGGCCCGGT
GACCTGGTGG CGATGATCCT GGCGCTGCTC GGCGTCGTCC TCGTCCTGCT CCTCGCCGTG
TACGCGCACC GCACCACCGA GGGCGTGACG GAGGACATCG AGAACGCCCT CCCTGACTTC
CTGGAACGTC TTCTCGACAT CCCGCTGAAC CTCCTCGAGG GTCTCGTCAC GTTCCTGCTG
CCGCTCCTCG TCATCGTCGA GCGGCTGATC CGGCGCCAGG TCCGCGTGGT CCTCGAGGCG
CTCGCGGCCG CAGTCGTCGC GGCGTTGCTG ACCGGCGCCG GCGCGTGGCT GCTCAGGTCG
TTCGCGCCGG ACGCGCTCGT CGACGGCCTC GCGATCGCCT CCGGCACAGC GCTGTCGCCG
GCGGTCGCCG CGATCGCCGC CCTGCTCACC ACGATCGGCT CGCGCGACCG GCGCCGCGCG
GTCGGGTGGT CGTGGAACCT GCTCTGGATC GTCCTCGTGC TCCAGGTGCT CATGGGCGCG
ATGTCCCTGC CCGGGGCCTT GGTCTCGGTG CTTCTCGGCC GCGCGCTGGG CCTGGCCGCC
CGGTACCTGT GGGGCGTGCG CGGGGAGCGC GCGTATGGTC GCGACCTGGT CACCGCCATC
CGCCGGGCCG GGCTCGATCC CTTGCGGATC CAGCGGATCG CTGATCCCGA GGACCTCGCC
GAGGCCACCG CCGAGCTCGT GACGACCAAC TCACCGATCG GCTACGTCAC CGAGCACCCG
GACGCGCTGC CGGCCCGTGC GGAGCGGCGG GCGGAGATCC GTGAGGAGCG AGGGGCGGAC
GACGACGGCG CGCCGCCGAC GTCGTCACCG GCCTTCATGG CGGCCACGTC GGAGCAGGCC
GACGACGGCG AACCCGCGCC GTTCTCGTCG CCCACCCCGG TCGTCACGCT CGACGACGAG
AGCGCGCCCG CCGACGCCGG ACCTCCCGCC CCGATTCGCC TCCGGGTGAG CGACCCGGCC
ACGGTGGCGC TCGCGCGCGA GGGCGAGAAC CGCGTGTACG CCGTCGTCGA CGCCGACGGC
ACCCGGTGGG ACGTGGTGGT GCTCGACGGC GACCGGCAGG TGGTCGGCAC GCTCGCCGCG
TTCTGGTCGA CGATCCGGCT CAAGGGCCTC GAGCAGCGAG CCGTGGTGTC GCTGCGGGCG
GCCGCGGCGC GCGCGGCCCT CATGACGTAC GCGGCGGCCG CCGCGGGGGT GCGGGCGCCC
AGGCTGCAGG GCATCGCGGA CGAGGAGGAC TCGGTGCTGC TCGTCGGGGA GCACGTGTCC
TCGGCCACGA CCCTGTCCGC GATGCAGCCG GACGACATCA CCGACGAGCT GCTCGACGGC
GCCTGGGAGC AGCTGCGGGT GGCGCACGAC GCCGGTCTGG CGCACCGGGC GATCACCGGC
GACGCGATCC TCGTGGCCAG CGGGCGCGAC GTGTGGCTCA CCGCCTGGGA GAACGGCGAG
ATCGCGGCGT CCGAGCTCGC CCGCCGGCTG GATCTCGCGC AGATGCTCGC GCTCCTGGCG
CTCACCGTCG GGCCCGAACG GGCCATGGCG AGCGCCTCGC GCTCCCTCAC GGAGGAGCAG
CTCGTCGCGA TCGCACCCAT CCTGCAGCCG GTGGCCCTGC CGCCCGCCAC CCGGGCGGCG
GCGCGCCGCG ACAAGCAGGT GCTCGCGCGC GTCCAGAACC TGCTCGTCGA CCTCATCCCG
ACGGCGCAGA CGGAACCGAT GCAGCTCGCC CGGTTCAGCG CCCGGACGGT CGTCACGGTC
ACCGTCGCCG TCATCGCCGG CTTCATCCTG CTGACCACGC TGAACTTCGA CCAGATCATC
GCCGCGGTGC GCGAGGCGAA CCCGGTGTGG ATGGTCGTGG CGTTCCTGCT GGGACTCCTC
ACCTACCTCG GCTCCGCGAT GAGCCTCGTC GCGTTCTCCC CCGAGAAGCT CCCCCTCTGG
CGCACCACGC TCGTGCAGGT GGCGGCGTCC GTCATCACGC TCGTGGCTCC CGCGGGGATC
GGGCCGGCCG CCCTCAACCT GCGGTACCTG CAGAAGAACC GCATCGCGAC CCCGATGGCG
CTCGCGACGG TGGCGCTCGT GCAGGTGTCG CAGTTCGTCA CCACCGTCCT GCTGCTCCTG
GTGATCGCTC TCGTCACCGG CTCGTCGGGC GCCCTGGACT CGTTGCCGTC CGGGGCCGTG
CTGCTCGTCG TCGCTCTCGT GCTCGTGGCC GCGTCGACGG CGTTCGCGTT CCCGGCGGTG
CGCCGCTGGG TGCTCGCCCG GCTGGTGCCG ATGCTGCGCC AGGTGTGGCC GCGCGTCGTG
TGGGTCGTCG GGCAGCCCGG ACGGCTCGCG ATGGGGATCG GCGGCAACCT CATCATGACC
ATCGGCTACC TCGCGGCGTT CCAGGCGGCG CTCGAGGCGT TCGCTCAGAG CGTCCCGCTC
ACGTCGCTGG CGATCATCTA CCTCGTCGGG ACGGCGGCGG GCTCCGCGAT CCCGACACCC
GGGGGCGTCG GGACCGTCGA GCTCGCGCTC ACGTCCGGCC TGCGGACGGC GGGCGTGCCG
ACGGCGGTGG CGGCGTCGTC GGCGGTCCTC TTCCGCGTGC TGACGTTCTG GGGCCGCGTG
CCCCTCGGCT GGCTCGCGAT GCGGTACCTG CAGAAGCGCG ACGCGATCTG A
 
Protein sequence
MSEADAPGTT VPQAPAPSVP PPTRTVEIID VPAHRLRRPG DLVAMILALL GVVLVLLLAV 
YAHRTTEGVT EDIENALPDF LERLLDIPLN LLEGLVTFLL PLLVIVERLI RRQVRVVLEA
LAAAVVAALL TGAGAWLLRS FAPDALVDGL AIASGTALSP AVAAIAALLT TIGSRDRRRA
VGWSWNLLWI VLVLQVLMGA MSLPGALVSV LLGRALGLAA RYLWGVRGER AYGRDLVTAI
RRAGLDPLRI QRIADPEDLA EATAELVTTN SPIGYVTEHP DALPARAERR AEIREERGAD
DDGAPPTSSP AFMAATSEQA DDGEPAPFSS PTPVVTLDDE SAPADAGPPA PIRLRVSDPA
TVALAREGEN RVYAVVDADG TRWDVVVLDG DRQVVGTLAA FWSTIRLKGL EQRAVVSLRA
AAARAALMTY AAAAAGVRAP RLQGIADEED SVLLVGEHVS SATTLSAMQP DDITDELLDG
AWEQLRVAHD AGLAHRAITG DAILVASGRD VWLTAWENGE IAASELARRL DLAQMLALLA
LTVGPERAMA SASRSLTEEQ LVAIAPILQP VALPPATRAA ARRDKQVLAR VQNLLVDLIP
TAQTEPMQLA RFSARTVVTV TVAVIAGFIL LTTLNFDQII AAVREANPVW MVVAFLLGLL
TYLGSAMSLV AFSPEKLPLW RTTLVQVAAS VITLVAPAGI GPAALNLRYL QKNRIATPMA
LATVALVQVS QFVTTVLLLL VIALVTGSSG ALDSLPSGAV LLVVALVLVA ASTAFAFPAV
RRWVLARLVP MLRQVWPRVV WVVGQPGRLA MGIGGNLIMT IGYLAAFQAA LEAFAQSVPL
TSLAIIYLVG TAAGSAIPTP GGVGTVELAL TSGLRTAGVP TAVAASSAVL FRVLTFWGRV
PLGWLAMRYL QKRDAI