Gene Bcav_4025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_4025 
Symbol 
ID7861123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4452344 
End bp4453306 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content74% 
IMG OID643868128 
ProductABC transporter related 
Protein accessionYP_002884028 
Protein GI229822502 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.426784 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCG TCATCTCGCT CGACCACGCC ACGCGGCGCT ACGGAGACGT CGTCGCGCTC 
GACGACGTCT CGCTGGAGGT GCCGGCCGGC GAGCTCGTCG GCCTGCTCGG CCCGAACGGC
GCCGGCAAGT CCACGCTGCT CAACCTGGTC AACGGGCTGC GCCCGACGAC GTCCGGCACG
GTCCGCATCT TCGGCGCCGA CCCGCGCGTC CCGGCGAGCC GCATCCAGCT CGGCACGACA
CCGCAGGAGA CGGGGCTGCC GCCCACGCTC CGCGTCGGGG AGGTCGTCGA CTTCGTGGGC
GGGCACTACC CGGATCCGAT GTCGCGGGAC GAGCTGCTGA GCCGGTTCGG CCTCGCCGAC
CTCGCGCAGC GCCAGACCGG TGGGCTGTCC GGCGGGCAGA AGCGGCGGCT CGCCGTCGCG
CTCTCCATCG TCGGTCGGCC TCGGCTGGTG CTCCTGGACG AGCCCACCAC CGGGCTCGAC
GTCGAGGCGC GGCGCCTGCT GTGGGACGCG GTGCGCGAGT ACCACGCCGA CGGCGCCACG
ATCGTCGTCA CGAGCCACTA CCTCGAGGAG ATCGAGGCGC TCGCTCAGCG GGTGGTCGTC
ATCGGGCACG GGCACGTGCT CGCCGACGAC GACCTCGCCA CGATCGTCGG CCGGGTCTCC
GCCCGGCACG TCCGGCTCCG CCTGGCCGGA GACGCGCGCG CCGTCGTCGA CGCGCTGCCG
GGCGTCGTCG ACGCGACCGC CGACGGCGAC CGCTGGACGA TCCTCACGAC CGACTCCGAC
GCCGTCATCC GCGCGCTCGT CACTCAGGGC GTGACGTTCT CGGGCCTCGA GGTCCGCGGC
GCCAGCCTGG AGGAAGCCTT CCTCGCCATG ACCGCAAGTG ACGACGACGG CGACGCCTCC
TCCGGTGCGC ACGTTGCGCC GTCGTCGTCC CCCTCCGACC AGACCCAGGG AGCACTCCGA
TGA
 
Protein sequence
MTAVISLDHA TRRYGDVVAL DDVSLEVPAG ELVGLLGPNG AGKSTLLNLV NGLRPTTSGT 
VRIFGADPRV PASRIQLGTT PQETGLPPTL RVGEVVDFVG GHYPDPMSRD ELLSRFGLAD
LAQRQTGGLS GGQKRRLAVA LSIVGRPRLV LLDEPTTGLD VEARRLLWDA VREYHADGAT
IVVTSHYLEE IEALAQRVVV IGHGHVLADD DLATIVGRVS ARHVRLRLAG DARAVVDALP
GVVDATADGD RWTILTTDSD AVIRALVTQG VTFSGLEVRG ASLEEAFLAM TASDDDGDAS
SGAHVAPSSS PSDQTQGALR