| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_4010 |
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| Symbol | hemE |
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| ID | 7861108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | + |
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| Start bp | 4434112 |
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| End bp | 4435224 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 643868113 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_002884013 |
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| Protein GI | 229822487 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.961191 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCGAT TCAACCATTC GGAGTTTCTC CGTCACAATC GACGTGTGAA TCACCACACC
GCCGCTTCGC CGTCCCCGGA CAATTCGCCC TTGCTCGCCG CCTATCACGG TCGGCCCGTC
GGGCCCGCGG TGTGGTTCAT GCGGCAGGCC GGTCGCTCGC TCCCCGAGTA CCGCGCGGCG
CGCGCCGGGA CCGAGATGCT CGAGGCGTGC CTCACCCCGG AGCTCGCCGC CGAGATCACG
CTGCAGCCCG TCCGGCGGCA CGGCGTCGAC GCCGCGATCT TCTTCTCGGA CATCGTCGTC
CCGCTCGCCC TCGCCGGCGT GGACGTCCAC ATCGAGCCCG GCCTCGGCCC GGTGATCGCG
GAGCCGGTCC GCGACGCCAC GGCCGCACGT GCGCTCGCCG CGCGCGCCCC GGGCGACGCC
GCCCGGATCA CCGAGGCCGT CCGGCTCACC GTCGCGGAGC TGGGCGCGAC GCCGCTCATC
GGCTTCGCGG GGGCACCGTT CACGCTCGCG GCGTACCTGG TCGAGGGCCG CCCGTCCCGC
GACCACCTCG CCGCGCGCAC GATGATGCAC GCCGACCCCG AGGCGTGGGA CGCGCTGCTC
GGCTGGGTGG CCGAGATCTC GGGCGCGTTC CTGCGGGCGC AGGTCATGGC CGGTGCGAGC
GCCGTGCAGC TGTTCGACTC GTGGGCCGGG TCGCTCGGCC GCGCCGACTA CGCCGCCCAC
GTCCAGCGCT ACAGCGCCCG CACGCTCGAC GCCGTCGCCG ATCTCGGCGT GCCCATGGTC
CACTTCGGCA CGGGGACGTC CGACCTGCTC GACCTGCTGC GCGACGCGAT CCCCGCCGGC
TCGCCCGGCA CGGGACCCGC CGTCGTCGGC GTCGACCACC GCATCGGGCT CGACGAGGCG
AACGCGCGTC TGGGCGGCGC GACGCCGCTG CAGGGCAACA TCGACCCGGC GTTCCTCGCC
GCCCCCTGGC CGGTGCTCGA GGCGCACGTG CGGGACGTCG TCGCGCGCGG CACCGCTGCC
CCGGGGCACG TCGTCAACCT CGGCCACGGC GTGCCGCCGG ACACCGACCC GGGCGTGCTC
ACGCGCGTCG TGGAGCTCGT GCACGGTGGC TGA
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| Protein sequence | MRRFNHSEFL RHNRRVNHHT AASPSPDNSP LLAAYHGRPV GPAVWFMRQA GRSLPEYRAA
RAGTEMLEAC LTPELAAEIT LQPVRRHGVD AAIFFSDIVV PLALAGVDVH IEPGLGPVIA
EPVRDATAAR ALAARAPGDA ARITEAVRLT VAELGATPLI GFAGAPFTLA AYLVEGRPSR
DHLAARTMMH ADPEAWDALL GWVAEISGAF LRAQVMAGAS AVQLFDSWAG SLGRADYAAH
VQRYSARTLD AVADLGVPMV HFGTGTSDLL DLLRDAIPAG SPGTGPAVVG VDHRIGLDEA
NARLGGATPL QGNIDPAFLA APWPVLEAHV RDVVARGTAA PGHVVNLGHG VPPDTDPGVL
TRVVELVHGG
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