Gene Bcav_4006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_4006 
Symbol 
ID7861104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4430304 
End bp4430912 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content73% 
IMG OID643868109 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002884009 
Protein GI229822483 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCACGAA CGGAGGCGCA GAACGCCGCG CTGCGAGCCT CGACGCGCGA CGCCGTGCAG 
ACCGCTGCCG TGCGCGTCTT CGCGCGGCAC GGGTTCGCGG CGTCGACGAT CCGCCAGATC
GCGCTCGAGG CCGGTCTCAG CGTCGGGTCG ATCTACCGCC ACTACGCCAC GAAGGATGCG
CTGTTCTCCG ACCTCCTCGA CACCGCGGCG AACGGTCTCG CCGCGACCGC GGCGGAGCTC
ACGGAGGCGG ACCGCCCGCT CGAGGCGCTG CACGTGTTCA CGGAGCGCTT CCTGGCGGGG
ATCGCGGCGG ACGACGGCGC GGCGGAGTTC GTCATGGTCG TGAACCACGG CTTCACGACG
GACACGCCGG CCGGGACGGT CGACCGGCTC GTCGCCGCCC ACGGCTCCCT GTGGGCGGCG
CTCGAGGGAC TCGTGCGGCG CGGCCAGTCC TCCGGCGACT TCTCCGCCGG CCACCCCGGA
CGCCTGACGA CCGCGTACCT GGCGATGCTC GCGGGCGTCA CGACGATGCG TCTCGCTCTC
GGCCCGGAGC GCCCCGTCCC GGAGGCGGAC GTCGTCCTCC GGATCCTCAC GAAGGAGTCA
CCCGCATGA
 
Protein sequence
MARTEAQNAA LRASTRDAVQ TAAVRVFARH GFAASTIRQI ALEAGLSVGS IYRHYATKDA 
LFSDLLDTAA NGLAATAAEL TEADRPLEAL HVFTERFLAG IAADDGAAEF VMVVNHGFTT
DTPAGTVDRL VAAHGSLWAA LEGLVRRGQS SGDFSAGHPG RLTTAYLAML AGVTTMRLAL
GPERPVPEAD VVLRILTKES PA