Gene Bcav_4003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_4003 
Symbol 
ID7861101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4427052 
End bp4428302 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content76% 
IMG OID643868106 
Producthistidine kinase 
Protein accessionYP_002884006 
Protein GI229822480 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.758597 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.4442 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACCCG ACGAGACGGA GGGCGGCGAC GTCGTGACCC CCGCCGCGGC GCGGCCTGCC 
CCGCCCGCGG CCGACCGGGT CGGAGCCCCG CGCGTCACAC CGCTCGACGT GATCCTGGCG
GTCGCCGTCA CGGCGACGGT CGCCGCGGCC ATCGCGACCT CCCGGGAGGA GGTCGCCGGC
TCGCCGGCGC TGGGCTACGT CTTCGCCGCG GCGTTCGGCG CCCTCATGTT CGTGCGACGT
ACCCAGCCGG TGATCGTCGT CGTCGCCACG AGCCTCGGCC TCATCTGGTA CTACGCGAGC
GGCCTGCCCT CGATCGGCCT CGCGGTGCCG GTGGCGGCCG CCCTGTACTC CGCTGCCGAG
GCGGGCCGGA CGCTCGTGGC GATCCTCGCC GCCGTCGCGC TCCTGCTCTT CACGTACGCC
TACCGGATCG GGGCGGGCCA GGACGCCGCC TACCTCCTCG GCTACGAGCT CGCCACGAAC
GTCGCCATCA TGGCGGCGGC GATCGCGCTG GGGGACGGGC AACGGTCACG GCGACGCCTG
CTCGCCGAGC AGCGGGAGGT CGCCCGGCGG CGGGAGGCGG AGCGCGAGGC GGAGGCGGCC
CGCCGGGTCG CCGACGAGCG GCTGCGGATC GCGCGCGACC TGCACGACTC GGTCGGGCAC
ACGGTGGTCG CCGTGTCGCT GCACGCCGAC GTCGCCGCGG AGGCGCTCGC GGCCGGCGAG
CCGGACGCCG CGGCCCGCTC CCTTGCGCTC GCGCGATCAG CGGCCGCCGA CTCGATGCGA
GAGCTCCGAG CGAGCGTCGG CCTCCTGCGC GACGGCGGTG CGCACCTCGA CCTCGATCGT
GTGCTGCTCG CGGCGCGTGA CGGCGGGCTC GTGGTGGACG CCGACGTCGA CGCCGGGTTG
GCGGACAGCG TTCCGCCGGA GGTGTGGGCC GCCGGCGTGC GCATCGTCCA GGAGTCGCTG
ACGAACGTGC TGCGGCACTC GGGTGCCGAG CACGTGAGCG TCGCCGTGCA CGAGGCGGAC
GACGTCGTGG AGCTCGAGGT GCGTGACGAC GGTGCCCGTG CGGCAGCGAC CGGGAGCGAG
GCCGCGTCCC AGCCGTCGGG CGGGCACGGT ATCCGAGGGA TGCGCGAACG CGCCGAGGAG
CTCGGCGGCA CGCTCGACGC CGGCCCTCCC GGAGGCGGGG ACGGCTGGGT GGTGGCCGCC
GTCCTGCCGC TGCCTCCGCC GTCGGCGGAC GGAACGGAGG AGAACCCATG A
 
Protein sequence
MAPDETEGGD VVTPAAARPA PPAADRVGAP RVTPLDVILA VAVTATVAAA IATSREEVAG 
SPALGYVFAA AFGALMFVRR TQPVIVVVAT SLGLIWYYAS GLPSIGLAVP VAAALYSAAE
AGRTLVAILA AVALLLFTYA YRIGAGQDAA YLLGYELATN VAIMAAAIAL GDGQRSRRRL
LAEQREVARR REAEREAEAA RRVADERLRI ARDLHDSVGH TVVAVSLHAD VAAEALAAGE
PDAAARSLAL ARSAAADSMR ELRASVGLLR DGGAHLDLDR VLLAARDGGL VVDADVDAGL
ADSVPPEVWA AGVRIVQESL TNVLRHSGAE HVSVAVHEAD DVVELEVRDD GARAAATGSE
AASQPSGGHG IRGMRERAEE LGGTLDAGPP GGGDGWVVAA VLPLPPPSAD GTEENP