| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3990 |
|---|
| Symbol | |
|---|
| ID | 7858053 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 4414341 |
|---|
| End bp | 4415294 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643868093 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002883993 |
|---|
| Protein GI | 229822467 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACGA CGACAGCGGT GGTGCGTCCG GGCGCGCGGG CGGCGGATCC GCCGCGCGCG
GGCGGGCGCA CCCGACGACG GCCGTCGCGC CAGTGGCGGA TCCAGGAACG GTGGGCGTGG
CTCTTCGTCG CCCTGCCCAT GCTCCTGTTC GCGATCTTCG TGCTGATCCC GGCCGGGATG
GCGCTCGTGC TGAGCTTCAG CAACTACTCG ATCATCGGCG ACACGGGCTG GGTCGGGATC
GACAACTACA CGAAGCTCTT CCTCGACCCG TACTTCTTCA TCGCGCTGCG GAACACGGCC
TGGTACACGC TGATGTTCGT CCCGCTGGGG CTGATCGTGG CCATCTCGAC GGCGCTGCTC
CTCAACCGGA ACGTGCGCGT GGCAGGGCTC TTCCGCACGC TGTTCTACAT CCCGGTCGTC
TCCTCGACGG TCGCGACCGC GACCATCTGG TACTGGCTGC TCAACCCGCA GTTCGGGATG
CTCAACGTGG CGCTCGGGTG GTTCGGGATC GACGGCCCGG CGTGGCTGTA CGACTCCGCG
TGGGCGATGC CGGCGATCGT GCTCATGAGC GTGTGGGCCG GTTTCGGCAC CAACATGATG
ATCTACCTGG GCGGCCTGCA GGGGATCCCG CCGCAGCTGT ACGAGTCGGC GCGCACGGAC
GGCGCGTCCG GGTGGCAGCA GTTCCGCTTC ATCACGATGC CGAGCCTGTC GCGGACGACG
TTCCTCGTCT CGACCCTGCT CGTCATCGGC GCGTTCCAGG TCTTCGACCA GGCCTACGTC
CTCACCAAGG GTGGCCCGGG CAACTCGACC ATCACGCTCG TCTACTACAT CTACACGCAG
GGCTTCGGGA ACCTCGAGAT GGGCTACGCG TCGGCCATCT CGTTCGTGCT GTTCGCGATC
ATCGCGGTCT TCGCGCTCAT CAACGTGCGG ATCACGGGAA GGGACAACAC ATGA
|
|---|
| Protein sequence | MTTTTAVVRP GARAADPPRA GGRTRRRPSR QWRIQERWAW LFVALPMLLF AIFVLIPAGM
ALVLSFSNYS IIGDTGWVGI DNYTKLFLDP YFFIALRNTA WYTLMFVPLG LIVAISTALL
LNRNVRVAGL FRTLFYIPVV SSTVATATIW YWLLNPQFGM LNVALGWFGI DGPAWLYDSA
WAMPAIVLMS VWAGFGTNMM IYLGGLQGIP PQLYESARTD GASGWQQFRF ITMPSLSRTT
FLVSTLLVIG AFQVFDQAYV LTKGGPGNST ITLVYYIYTQ GFGNLEMGYA SAISFVLFAI
IAVFALINVR ITGRDNT
|
|---|
| |