Gene Bcav_3921 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3921 
Symbol 
ID7858734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4340163 
End bp4341218 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content73% 
IMG OID643868024 
ProductAlpha/beta hydrolase fold-3 domain protein 
Protein accessionYP_002883924 
Protein GI229822398 
COG category[I] Lipid transport and metabolism 
COG ID[COG0657] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATACGG TCGACCGCGC CGCCGGCGAC GACGGCGCGA CGGGTCCGTC CCGCCGTCGT 
CGCCGCTGGC GCGTGGCGGC GATCGCCGCG GTCGTGCTCG CGGTCGCCGT GGGTGTGCCG
CTGCTCGTGT ACCAGGTGAG CGTGCAGCCG GGTGTGGCGA TCGCGCGCGG TGTGTTCGAA
CGCGGCGACG CCGTGATCGC CGGGCCGGGG GTGCCGATCG AGCGCGACAC GGTGTCGACG
CATCTCGCGA TCCCGGTTCC GGTGGACGGT GCGCCGGACG CCCGCCTCGA CGTCTACGCC
CCGCGGGACG CCGAGGCGGG CGCCGACCTC CCCGTCGTGC TGTGGATCCA CGGCGGCGGC
TTCATCTCGG GTTCGCCGGC GGCGCTCGCG GGGTACACGA CGGTGCTGGC CGACGCCGGC
TATGTGGTCG CGAGCCTCGA GTACTCGTTG GCGCCGGAGG TTCGGTACCC GGCGCCGGTG
CTGCAGGCGG AGGCCGCGCT GACGTACCTG CGCGAGAACG CGGCGACGTA CGGCGGGGAC
GCGAGCCGCG TCGTCGTCGG CGGTGACTCC GCCGGGGCGC AGATCGCGAG CCAGGTGGCC
GCCGTCGAGA CGTCTCCCGC ACTCGCCGAC GAGATGGGTG TGACGCCCGC CCTCGGGCCG
GACGAGCTGC GCGGCGCGAT CCTTTTCTGC GGGCTGTACG ACATGGACAC GGTCGGGAGC
ACGGGATTCC CGGGGCTGCG GACGTTCCTG TGGTCCTACA CCGGCCACCG CGACTGGTGG
ATGTTCCCGG CGATCGACCA GCTCTCGACG ACGCAGCAGG TCACCGGGGC GTACCCCGCC
ACGCTGCTCG CGGTCGGTGA TGCGGACCCG TTCGAACCGC AGGCGCAGGA GCTCGCGGCC
GCGCTGGACG GCTCCGACGT GGACGTGTCG ACGGTGTTCT GGGAGGACGC CGGGCTCGGG
CACGAGTACC AGTTCGACTT CCGGCGGCCC GAGGCTCGGG AGACCCTCGA CGCGACGCTA
GCGTTCCTCA CGCGGGTCAC GGAGGAGGGG TCGTGA
 
Protein sequence
MDTVDRAAGD DGATGPSRRR RRWRVAAIAA VVLAVAVGVP LLVYQVSVQP GVAIARGVFE 
RGDAVIAGPG VPIERDTVST HLAIPVPVDG APDARLDVYA PRDAEAGADL PVVLWIHGGG
FISGSPAALA GYTTVLADAG YVVASLEYSL APEVRYPAPV LQAEAALTYL RENAATYGGD
ASRVVVGGDS AGAQIASQVA AVETSPALAD EMGVTPALGP DELRGAILFC GLYDMDTVGS
TGFPGLRTFL WSYTGHRDWW MFPAIDQLST TQQVTGAYPA TLLAVGDADP FEPQAQELAA
ALDGSDVDVS TVFWEDAGLG HEYQFDFRRP EARETLDATL AFLTRVTEEG S