Gene Bcav_3901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3901 
Symbol 
ID7858714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4320958 
End bp4322883 
Gene Length1926 bp 
Protein Length641 aa 
Translation table11 
GC content75% 
IMG OID643868005 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_002883905 
Protein GI229822379 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCGA CCACCCGTCT GCCCCGTGTG CGCGCGTCCG AGCTCGTCGG CCGCGGCTGG 
CTCGGCACGG GCGGCCGCGA GCTGAGCCTC GCCGACCTGC GCGGCCGCGT CGTCGTCCTC
GACTTCTGGA CGTTCTGCTG CATCAACTGC CTGCACGTCC TCGACGAGCT GCGCGAGCTC
GAGGAGGCCC GCCGCGACGT GCTGACGATC GTCGGCGTCC ACTCGCCGAA GTTCGTGCAC
GAGGCCGACC CCGAGGCTCT CGCCGCCGCC GTCGACCGGT ACGAGGTGCG CCACCCCGTG
CTCGACGACC CCGAGCTCGT CACCTGGTCC GCCTACGGTG CTCGCGCCTG GCCCACGCTC
GTGGTCATCG ACCCCGAGGG CTACGTCGTC GCGCAGATGG CCGGCGAGGG TCATGCGTCC
GCGCTCGAGG CTCTCGTCGA CGAGCTCGTG GAGGAGCACC GAGCGAAGGG CACGCTCCGG
ACGGATGACG ACGGCGGCCC GTACGTCCCG CCGTCGCCCA CCCCGGGCAC CCTGCGGTTC
CCCGCCAAGG CGATCGCGCT GGAGAACGGG AACCTGCTCG TCGCCGACGC CGGCCACCAC
TCCCTGGCGG AGCTCGGCCC CGACGGCGAG ACGCTCGTCC GGCGCGTCGG CTCCGGTGAG
CGGGGCCTCG TCGACGGCGG CCCGAACGTC GCGCGGTTCA GCGAGCCCAA CGGACTGTGC
CTCGTGCCCG TCGAGCTGCG CGCCCGCCTG GGGTACGACG TGCTCGTCGC CGACACCGTC
AACCACGCCC TGCGGGGCGT CCGGCTCGCC GACGGACATG TCAGCACCGT CGCCGGGACC
GGCCAGCAGT ACGTCGTCGG GGCGCCGGAC AACGCCAGCG ATCCGCACGG CGGCACGCAC
CCGGTCGGGT TCGGCGACCA GTTCGTACCG ACGTCGGTGA AGCTCAGCTC GCCGTGGGAC
GTCGCGTGGT CGCCGGATCT CGCGGCGTTC GTCGTCGCGA TGGCGGGCAA CCACACCCTG
TGGGCGTTCG ACGACGAGCA GGGGTCCCTG ACGCGGCTCG CCGGCACCGA GCACGAGGGC
CTGCGCGACG GGCCCGCCGC CGAGGCCTGG TTCGCGCAGC CGTCGGGGCT CGCCGTCGCC
CAGGACGGGC GGATCTGGGT GGCCGACTCC GAGACGTCGG CGCTGCGGTG GCTGGATCCG
GCGGGTGGCG ACGTGCACAC CGCCGTCGGG CAGGGGCTGT TCGAGTTCGG GCACCGCGAC
GGCGCTGCCG ACCAGGCCCT GCTGCAGCAC CCGCTCGGCG TCGCCGCGCT GCCGGACGCC
TCCGTGCTCG TCGCCGACAC GTACAACGGG GCGCTGCGCC GCCACGACCC GGCGACGGGC
GTCGTCACGA CGATCGCGAC CGGCCTCGCG GAGCCGAGCG ACGTCGTCGT CCTCCAGGCG
AGTGACGACG ACGGCGGTCC GGCGGTCCTG GTCGTCGAGT CGGCCGGGCA CCGGATCACC
CGCGTGGCCC TGCCCGCCGA GCTGCGCGGC TCGCTGCACG ACGGCGCCGC CCACCGCACG
CAGCGCCCGG TCACGGAGCT GGCCGCGGGT GCGCTCCGGC TGGAGGTCCC GTTCCTGCCG
GCCCCCGGTC AGAAGCTGGA CGACCGCTAC GGCCCCGCGA CGCGCCTCCA GGTGAGTGCC
ACGCCGCCGG AGCTGCTCGT CTCGGGTGCC GGCGACGACG TCGACCTGGC TCGCGACCTC
GTGCTCGCAC CGGGGGAGGG CGTGCTGCAC GTGACGGCGC AGGCCGCGTC GTGCGACGCC
GACCCGGCCA TCGAGTACCC CGCGTGCCAC CTGGCGCAGC AGGACTGGGG GGTGCCGGTG
CGGGTGGTCG CGCGGACCGA CGACGACGAC GCCGCCGAGC CGTTGGTGCT TCCGCTGCGC
GGCTGA
 
Protein sequence
MPATTRLPRV RASELVGRGW LGTGGRELSL ADLRGRVVVL DFWTFCCINC LHVLDELREL 
EEARRDVLTI VGVHSPKFVH EADPEALAAA VDRYEVRHPV LDDPELVTWS AYGARAWPTL
VVIDPEGYVV AQMAGEGHAS ALEALVDELV EEHRAKGTLR TDDDGGPYVP PSPTPGTLRF
PAKAIALENG NLLVADAGHH SLAELGPDGE TLVRRVGSGE RGLVDGGPNV ARFSEPNGLC
LVPVELRARL GYDVLVADTV NHALRGVRLA DGHVSTVAGT GQQYVVGAPD NASDPHGGTH
PVGFGDQFVP TSVKLSSPWD VAWSPDLAAF VVAMAGNHTL WAFDDEQGSL TRLAGTEHEG
LRDGPAAEAW FAQPSGLAVA QDGRIWVADS ETSALRWLDP AGGDVHTAVG QGLFEFGHRD
GAADQALLQH PLGVAALPDA SVLVADTYNG ALRRHDPATG VVTTIATGLA EPSDVVVLQA
SDDDGGPAVL VVESAGHRIT RVALPAELRG SLHDGAAHRT QRPVTELAAG ALRLEVPFLP
APGQKLDDRY GPATRLQVSA TPPELLVSGA GDDVDLARDL VLAPGEGVLH VTAQAASCDA
DPAIEYPACH LAQQDWGVPV RVVARTDDDD AAEPLVLPLR G