| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3838 |
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| Symbol | |
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| ID | 7860578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | - |
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| Start bp | 4257347 |
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| End bp | 4258207 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643867942 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_002883842 |
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| Protein GI | 229822316 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.066838 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGGCT CCGAGACGGA CATCCCGCCG CAGCAGCAGG AGTGGCCCGG CCGGACCGAC
GCCATGGAGC CGCGCCCGGA CCACGGCGAG TCCAGCTACG TGGGGCGGGA CCGCCTCACC
GGGAAGCGCG CGCTCGTGAC CGGCGGGGAC TCCGGCATCG GGCGGGCGAC GGCGATCGCG
TTCGCCAAGG AGGGGGCCGA CGTCGCCATC AGCTTCCTCC CCGAGGAGCA GGGCGACGCC
GAGGAGACGC GCCGCGCGGT CGAGGCCGCG GGCCGGCGCT GCCTGGTGCT CCCGACCGAT
CAGCGCACCG AGGAGGCGAA CCGCGACCTG GCCGGGGCCG CGCTGGAGGG CCTCGGCGGC
ATCGACGTGC TCGTCTCGAA CGCCGCCTTC CAGATGGGCA GGCAGACGGG GATCGAGAAC
TTCACCGACT CTCAGCTCCG GCAAGTGTTC GAGACGAACG TGTTCGCCAC GTTCTGGCTG
GTCAAGGCGG TCGCACCGCA CCTGGGCGCG GGCGCGAGCA TCGCCATCAC GACGTCGATC
CAGGCGTACG ACCCATCGCA GCCCTTGCTC GACTACGCCG CCACGAAGGC GGCGCTGAAC
AACCTCATGG TCAACCTCGC GGCCGAGCTA GGCCCGAGGG GGATCCGCGT GAACGCCGTC
GCGCCCGGAC CGATCTGGAC CCCGCTGATC CCGAGCACGT TCGACGCCGA GAAAGTCGCC
TCGTTCGGAG CGGACACGCC GCTCGGGCGC GCGGGCCAAC CCGTCGAGGT CGCGTCGGCG
TTCGTGTTCC TGGCGTCCGA CGACGCCTCG TACGTCAGCG GCACCGTGGT CGGCGTGACG
GGCGGCAGGG CCGTGTTCTG A
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| Protein sequence | MGGSETDIPP QQQEWPGRTD AMEPRPDHGE SSYVGRDRLT GKRALVTGGD SGIGRATAIA
FAKEGADVAI SFLPEEQGDA EETRRAVEAA GRRCLVLPTD QRTEEANRDL AGAALEGLGG
IDVLVSNAAF QMGRQTGIEN FTDSQLRQVF ETNVFATFWL VKAVAPHLGA GASIAITTSI
QAYDPSQPLL DYAATKAALN NLMVNLAAEL GPRGIRVNAV APGPIWTPLI PSTFDAEKVA
SFGADTPLGR AGQPVEVASA FVFLASDDAS YVSGTVVGVT GGRAVF
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