Gene Bcav_3677 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3677 
Symbol 
ID7861019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4090261 
End bp4091175 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content69% 
IMG OID643867780 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002883681 
Protein GI229822155 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.842824 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGC TGTCGCCGCA GGTGAGGGCA GGATCCGGGA CGCCGGGAGC GCCGTCGTCC 
GCCGCTGGAG CGCCCCGACG CCGGGCCGCC CGGAGGCGCT GGTCGCTCGG CCGCGTCGGC
GCCGAGCTGG GCATGCTCGT GGTCGCCGCG GTGTTCTTCT TCCCGTTCTA CGTGTTCCTC
GCGGTCGCGC TGAAGACGCC CGCCGACCTC GCGGCGTCAC CCCTCGCGTT CCCCACCGAC
CCCGCCCTGG CCAACTTCGC CGAGGCGTGG CAGCGCGGCG ACCTCGGCCA GGCGATGGGG
AACTCCGTGG TGGTCACGGC GCTGAGCGTC GCGCTCCTCG TGCTCGCCGG CTCGTTCGCC
GCGTACGCGC TGGCGCGCCG GGCCTCGCGC CTGTCCTACG GCCTCTACCT CGCGTTCCTG
CTCGGCCTGA TGATCCCGCT GCAGCTCGGC ATGGTGCCGC TGTACCAGCT GATGCGTGAC
GCGAACCTGC TGCAGACGTA CACGTCGCTC ATCATCTTCG AGGTCGGGCA CCAGCTGCCG
CTCGTGGTGT TCCTCTACAC GGGCTTCCTG CGGGCGCTGC CGCGCGAGTA CGAGGAGGCG
GCGCGGGTCG ACGGCGCGGG CACGATCACG GCGTTCCGCA AGATCGTGTT CCCGCTGCTG
CGCCCGATCA CCGGGACGGT CGTCATCCTG ACGTCGATCA ACATCTGGAA CGACTTCCTC
ACGCCGCTGC TCTACGTCGG CGGGAGTGCG CAGCAGACGC TGCCGGTGGC GATCTTCGCG
TTCCGCGGCG AGTTCGCGAG TCAGTGGCAG ATCATCTTCG CCGGGATGGG GATCGCGATC
CTGCCGATCC TCGTCGTCTA CTTCCTGCTC CAGAAATACA TCATCAAGGG CTTCGCGAGC
GGCATCAAAG GCTGA
 
Protein sequence
MSTLSPQVRA GSGTPGAPSS AAGAPRRRAA RRRWSLGRVG AELGMLVVAA VFFFPFYVFL 
AVALKTPADL AASPLAFPTD PALANFAEAW QRGDLGQAMG NSVVVTALSV ALLVLAGSFA
AYALARRASR LSYGLYLAFL LGLMIPLQLG MVPLYQLMRD ANLLQTYTSL IIFEVGHQLP
LVVFLYTGFL RALPREYEEA ARVDGAGTIT AFRKIVFPLL RPITGTVVIL TSINIWNDFL
TPLLYVGGSA QQTLPVAIFA FRGEFASQWQ IIFAGMGIAI LPILVVYFLL QKYIIKGFAS
GIKG