| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3624 |
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| Symbol | |
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| ID | 7860966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | + |
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| Start bp | 4034353 |
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| End bp | 4035519 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643867727 |
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| Product | L-rhamnose isomerase |
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| Protein accession | YP_002883628 |
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| Protein GI | 229822102 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4952] Predicted sugar isomerase |
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| TIGRFAM ID | [TIGR02635] L-rhamnose isomerase, Streptomyces subtype |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000224876 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0801622 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCCTCG CCCCCGCCGT CGCCGAACGG CTCGCCGTCC AGGAGATCGA GCTGCCGTCC
TGGGCGTTCG CCAACTCCGG CACACGCTTC CGCGTGTTCG GGCAGCCGGG CGTCCCCCGC
ACACCGCAGG AGAAGATCGC CGACGCCGCG CAGGTGCACG CACTGACCGG CCTCGCTCCG
CGGGTCGCGC TGCACATCCC GTGGGACCTC GTCGACGACT TCGGCGCGCT GGCCACCTTC
GCCGCCGACC ACGGCGTCGG CATCGGGACG ATCAACTCCA ACACGTTCCA GGACGACGCC
TACAAGCTTG GCAGCCTGTG TCACAGCGAT CCCGGCGTGC GGCGGAAGGC GATCGACCAC
CACCTCGCCT GCGTCGACGT CATGGACGCC ACGGGTTCCA CGGACCTCAA GATCTGGCTG
GCGGACGGCA CGAACTACCC CGGCCAGGAC GACATGCGCG CCCGGCAGGA CCGCCTCGCA
GAGGGGCTCG CCGAGATCTA CGCCCGGCTG GGCGAGCACC AGCGGATCGT GCTCGAGTAC
AAGTTCTTCG AGCCGGCGTT CTATCACACG GACGTGCCCG ACTGGGGCAC CTCGCTCGTC
CAGTGCCTGG CCCTCGGCGA CCGCGCCGTC GTCTGCCTCG ACACCGGGCA CCACGCGCCC
GGCACCAACA TCGAGTTCAT CGTCATGCAG CTGCTGCGCC TGCGAAAGCT CGGCGCGTTC
GACTTCAACT CACGGTTCTA CGCCGACGAC GACCTCATCG TCGGCGCGGC CGACCCGTTC
CAGCTGTTCC GCATCCTCCT CGAGGTGGTC CGCGGGGGCG GGTACGGCCC GGACAGCGGC
GTCACGTTCA TGCTCGACCA GTGCCACAAC ATCGAGCAGA AGATCCCCGG CCAGATCCGG
TCGGTGCTCA ACGTGCAGGA GGCGACGGCG AAGGCTCTGC TGGTCGACCG GGCCGCGCTC
GACCGAGCGC AGCGCGACGG CGACGTCCTC GCCGCGAACG GCATCCTCAT GGACGCGTTC
GCGACCGACG TCCGGGCCGA CCTCGCCGAC TGGCGGGAGA GTCGCGGCCT GCCGGCCGAC
CCGATGGCCG CCTATGCGGC GAGCGGCTAC CAGGCCAGGA TCGAGGCAGA GCGCGTCGGC
GGCGAGCAGG CCGGCTGGGG CGCCTGA
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| Protein sequence | MSLAPAVAER LAVQEIELPS WAFANSGTRF RVFGQPGVPR TPQEKIADAA QVHALTGLAP
RVALHIPWDL VDDFGALATF AADHGVGIGT INSNTFQDDA YKLGSLCHSD PGVRRKAIDH
HLACVDVMDA TGSTDLKIWL ADGTNYPGQD DMRARQDRLA EGLAEIYARL GEHQRIVLEY
KFFEPAFYHT DVPDWGTSLV QCLALGDRAV VCLDTGHHAP GTNIEFIVMQ LLRLRKLGAF
DFNSRFYADD DLIVGAADPF QLFRILLEVV RGGGYGPDSG VTFMLDQCHN IEQKIPGQIR
SVLNVQEATA KALLVDRAAL DRAQRDGDVL AANGILMDAF ATDVRADLAD WRESRGLPAD
PMAAYAASGY QARIEAERVG GEQAGWGA
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