Gene Bcav_3577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3577 
Symbol 
ID7860841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3977302 
End bp3979473 
Gene Length2172 bp 
Protein Length723 aa 
Translation table11 
GC content76% 
IMG OID643867680 
Productglycoside hydrolase family 3 domain protein 
Protein accessionYP_002883581 
Protein GI229822055 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1472] Beta-glucosidase-related glycosidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.622283 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGAGA CCGCCGCCTC CCGGCCCTGG CTCGACACCT CGCTGGACGT CCGCGAGCGC 
GCCGGCCTGC TGCTCGCCGC GATGACGCTC GAGGAGAAGG TCGGCCAGCT GCACCAGATC
CCGAACGCCG ACCCGGTGCG CGACGCCGAG GCGCTCGCCG CGGGCGCGAT CGGCACCACG
CTGGTGGCGA GCGGTGAGCA CGCCGGCAAC GTGCGCGACG CCGGGACGCG GGCGCGCGCC
GTCACCGGGC TGCAGCGGGC GGCGGTGACC ACGTCGCGGC TCGGCATCCC GCTGATCGTC
GCCCGCGACG TCATCCACGG GCACCGCACC GTGTTCCCGA TCCCGCTCGG CCAGGCGGCG
TCGTTCGACG CCGGCCTGGT GCGCGACGCC GCCCGCGCCG CGGCCGTGGA GGCGAGCGCC
GACGGCGTGC GATGGACGTT CGCGCCCATG GTCGACGTCA CGATCGACCC CCGCTGGGGC
CGCGTCGCCG AGGGCTACGG CGAGAGCGCG TGGCTCACCG CGCACCTCGG GGCGGCGGCG
GTCCGCGGCT TCCAGGGCGA CGACCTGGGC CGGCCGGACG CGCTCGTCGC CTGCGCGAAG
CACTACGTCG GGTACGGCCT CGCGCAGGGC GGGCGCGACT ACGCGGAGGT CGACGTCGGC
CCCGTCACCC TGCACAACCG GCACCTGCGC CCGTTCGCGG CCGCGGTCGA TGCCGGCGTC
GGCACCGTGA TGACGGCGTT CCACACGCTC GACGGGACGC CGATGACGGC GCACCGGCCG
CTCGTCCGCG AGCACCTCAA GGGAACGCTC GGGTTCGACG GCGTGGTCGT CTCGGACTGG
GACGCCGTCG GGGAGCTTCT CCGCCACGGC GTCGCCGCGG ACCTCGGCAG CGCGACGCGG
CTCGCCCTCG GGGCCGGGGT CGACGTCGAC ATGGTGACCG GCGGGTACGC GCGGCACCTC
GCGGAGCTCG TGCGGTCGGG TCACGTGCCG GAGGCGTTGG TGGACGACGC CGCCCGGCGG
GTCCTCGAGC TGAAGCTCCG GCTGGGCCTG TTCTCCTCCT GGGAGGTCGA CGACGCCCGC
GCCGCGACCG TCCAGCTCGC TCCGCCGCAC CGCGAGCTGG CGAGGCGCGC CGCGGCGTCG
TCGCTCGTGC TGCTCGAGAA CTCCGGCGTC CTGCCGCTGG CGGCGCCGCG GCGGGTCCAC
GTGACGGGTG CGTTCGCGCA GGCGCGCGAG GAGCTGTTCG GTACGTGGAC GCTCGACGGG
CGCGGCGAGG ACGTGACGAC CGTCGAGGAG GCGCTGCGCG AGCGGTACCC CGACGCCGAG
ATCACCGCCG ACGACGGCCG GTTCCCTGAC CGCACGCTCG TCGCGGCGCG CGAGGCGGAC
GTCGTCGTCG CGTGCGTCGG CGAGCACCCG TCGCGCAGCG GCGAGGCGAA CTCCGTGACG
TCGCTCGACC TGCCGCCCGG GCAGACGGAG CTGCTCGTCG CGCTGGCCGG CCTCGGCACA
CCGGTGGTGG TCGTGGCCGT GACCGGTCGG CCGCTCGCGC TGGGGCGGGT CGCCTCGCTC
GCCGACGCTC TGCTCATCGC GTTCCACCCG GGCGTCGAGG GTGGCCGCGG GATCGTCGAC
GTGCTGAGCG GCGACGTCCC GGCGTCGGGC CGGCTGCCCA TGACGCTGCC GCGCAGCGTG
GGCCAGGTCC CGATCCACGT GGGCCAGCTC CCGACCGGGC GACCGATCCC CGCGGCGAGC
GACGTCGTCG TCGGCCGGTA CCGCGACTCC TCCGACCTGC CCGCATACCC GTTCGGGTTC
GGGCTGGGGT ACGCGGACGT CGCCTACGGC GAGCTCGACG TCGTCCCGCT GGACGGCGCC
GCCGACGGCG CTGTGCTCGA GGCGGGCGTC ACGGTGCGGA ACGTCGGGTC GCGAGACGCC
GTCGAGACGG TGCAGCTGTA CGTGCGCGAC CACGTGGCGG CGGTGTCCCG GCCGCTCACG
GAGCTGGCCG GCGTCGTCCG CGTGCCGCTC GCGGCCGGCG CCGCGGAACG CGTGACGTTC
CGGCTGGACC GCGGGTCCCT CGGGTACCGG GACTCCTCGG GCGCGCTCGT CGTCGAGCCG
GGCGAGTTCA CCGTGCGGAT CGGGCCGCAC GCCGGGGCCG GGCCGAGCTC GACGCTCTCC
CTCGAGCTCT GA
 
Protein sequence
MTETAASRPW LDTSLDVRER AGLLLAAMTL EEKVGQLHQI PNADPVRDAE ALAAGAIGTT 
LVASGEHAGN VRDAGTRARA VTGLQRAAVT TSRLGIPLIV ARDVIHGHRT VFPIPLGQAA
SFDAGLVRDA ARAAAVEASA DGVRWTFAPM VDVTIDPRWG RVAEGYGESA WLTAHLGAAA
VRGFQGDDLG RPDALVACAK HYVGYGLAQG GRDYAEVDVG PVTLHNRHLR PFAAAVDAGV
GTVMTAFHTL DGTPMTAHRP LVREHLKGTL GFDGVVVSDW DAVGELLRHG VAADLGSATR
LALGAGVDVD MVTGGYARHL AELVRSGHVP EALVDDAARR VLELKLRLGL FSSWEVDDAR
AATVQLAPPH RELARRAAAS SLVLLENSGV LPLAAPRRVH VTGAFAQARE ELFGTWTLDG
RGEDVTTVEE ALRERYPDAE ITADDGRFPD RTLVAAREAD VVVACVGEHP SRSGEANSVT
SLDLPPGQTE LLVALAGLGT PVVVVAVTGR PLALGRVASL ADALLIAFHP GVEGGRGIVD
VLSGDVPASG RLPMTLPRSV GQVPIHVGQL PTGRPIPAAS DVVVGRYRDS SDLPAYPFGF
GLGYADVAYG ELDVVPLDGA ADGAVLEAGV TVRNVGSRDA VETVQLYVRD HVAAVSRPLT
ELAGVVRVPL AAGAAERVTF RLDRGSLGYR DSSGALVVEP GEFTVRIGPH AGAGPSSTLS
LEL