Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_3571 |
Symbol | |
ID | 7860835 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 3967685 |
End bp | 3968680 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 643867674 |
Product | transcriptional regulator, LacI family |
Protein accession | YP_002883575 |
Protein GI | 229822049 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.16247 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGATCT ACGACGTCGC CGAACGGGCC GGCGTCGGCA TCGCCACCGT GAGCCGAGCG ATGCGGCCCG GCGGCTCCGT CTCGGAGCGC ACCCGAGGCC GCGTCCAGGC GGCGATCGAC GAGCTCGGGT TCCGGCCGAG CCACCTGGGC ACGTCCCTGG CCTCCCGCCG GCACGCAGCG AACGGCATCG TGTTTCCCGA CCTCTCGGGC CCGTACTTCG CGGAGGTCAT CCTCGGCTAC GAGGAGACCG CCACGCGTCT CGGCCGCAGC GTGCTGATCC TGTCGACGGA AGGCCGCGAC GACCCCGTCG CCGCCGTCCG CGACCTCGCC GCGCGGGTCG ACGGGCTCGT GCTGCTCGGT CGCACTGTCC CCGACGACGT CGTCACGCAG CTCGCGCGGA GCGGGCTGCC GGTCGCGTTC ATCGCCCGCC CGGCGACCGA CGGCGTCGCC ACCGTGCGCG TCGACAACGC CGGCGGGGCG CGCGAGCTCG CGGCGCACCT CCTCGAGCGC GGCTTCACCG CCCCGCGGTT CCTCGGCGAC CCCGACGCCA GCCCCGACGT CGAGGAACGG TGGGACGCGC TGCGTGCCAC GCTCGCCGCC GGCGGCGTCC ACCTCACGCT CACGCGCGCC GGGTTCTCCG TCGCCTCCGG CCACACCGCC GCGCACCAGG TCCTGGGTGA GACGGCACGG CCCGACGTCC TCGTCTGCGC GAACGACGAG GTGGCGCTCG GCGCGATCGA CGCCGCCGAG GAGCTGGGGC TCACGGTCGG CCGCGACGTC GCCGTCACCG GCTGGGACGA CATCATGGCC GCCCAGTTCT CACGCCCCGG GCTGACGACC GTCCGCCAGC CGATGCGGCG CCTCGGCGCC GTCGCCGCCG AGCTGCTCGA CGAACGCCTG CGCGACCCGT CGACCCCCGC ACGTTCCGAC GTCCTACCCG CACGTCTCGT GGTGCGACCA AGCACCACGA GCGCCCCACC AGGAGGAAAA CCATGA
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Protein sequence | MTIYDVAERA GVGIATVSRA MRPGGSVSER TRGRVQAAID ELGFRPSHLG TSLASRRHAA NGIVFPDLSG PYFAEVILGY EETATRLGRS VLILSTEGRD DPVAAVRDLA ARVDGLVLLG RTVPDDVVTQ LARSGLPVAF IARPATDGVA TVRVDNAGGA RELAAHLLER GFTAPRFLGD PDASPDVEER WDALRATLAA GGVHLTLTRA GFSVASGHTA AHQVLGETAR PDVLVCANDE VALGAIDAAE ELGLTVGRDV AVTGWDDIMA AQFSRPGLTT VRQPMRRLGA VAAELLDERL RDPSTPARSD VLPARLVVRP STTSAPPGGK P
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