Gene Bcav_3571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3571 
Symbol 
ID7860835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3967685 
End bp3968680 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content75% 
IMG OID643867674 
Producttranscriptional regulator, LacI family 
Protein accessionYP_002883575 
Protein GI229822049 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.16247 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGATCT ACGACGTCGC CGAACGGGCC GGCGTCGGCA TCGCCACCGT GAGCCGAGCG 
ATGCGGCCCG GCGGCTCCGT CTCGGAGCGC ACCCGAGGCC GCGTCCAGGC GGCGATCGAC
GAGCTCGGGT TCCGGCCGAG CCACCTGGGC ACGTCCCTGG CCTCCCGCCG GCACGCAGCG
AACGGCATCG TGTTTCCCGA CCTCTCGGGC CCGTACTTCG CGGAGGTCAT CCTCGGCTAC
GAGGAGACCG CCACGCGTCT CGGCCGCAGC GTGCTGATCC TGTCGACGGA AGGCCGCGAC
GACCCCGTCG CCGCCGTCCG CGACCTCGCC GCGCGGGTCG ACGGGCTCGT GCTGCTCGGT
CGCACTGTCC CCGACGACGT CGTCACGCAG CTCGCGCGGA GCGGGCTGCC GGTCGCGTTC
ATCGCCCGCC CGGCGACCGA CGGCGTCGCC ACCGTGCGCG TCGACAACGC CGGCGGGGCG
CGCGAGCTCG CGGCGCACCT CCTCGAGCGC GGCTTCACCG CCCCGCGGTT CCTCGGCGAC
CCCGACGCCA GCCCCGACGT CGAGGAACGG TGGGACGCGC TGCGTGCCAC GCTCGCCGCC
GGCGGCGTCC ACCTCACGCT CACGCGCGCC GGGTTCTCCG TCGCCTCCGG CCACACCGCC
GCGCACCAGG TCCTGGGTGA GACGGCACGG CCCGACGTCC TCGTCTGCGC GAACGACGAG
GTGGCGCTCG GCGCGATCGA CGCCGCCGAG GAGCTGGGGC TCACGGTCGG CCGCGACGTC
GCCGTCACCG GCTGGGACGA CATCATGGCC GCCCAGTTCT CACGCCCCGG GCTGACGACC
GTCCGCCAGC CGATGCGGCG CCTCGGCGCC GTCGCCGCCG AGCTGCTCGA CGAACGCCTG
CGCGACCCGT CGACCCCCGC ACGTTCCGAC GTCCTACCCG CACGTCTCGT GGTGCGACCA
AGCACCACGA GCGCCCCACC AGGAGGAAAA CCATGA
 
Protein sequence
MTIYDVAERA GVGIATVSRA MRPGGSVSER TRGRVQAAID ELGFRPSHLG TSLASRRHAA 
NGIVFPDLSG PYFAEVILGY EETATRLGRS VLILSTEGRD DPVAAVRDLA ARVDGLVLLG
RTVPDDVVTQ LARSGLPVAF IARPATDGVA TVRVDNAGGA RELAAHLLER GFTAPRFLGD
PDASPDVEER WDALRATLAA GGVHLTLTRA GFSVASGHTA AHQVLGETAR PDVLVCANDE
VALGAIDAAE ELGLTVGRDV AVTGWDDIMA AQFSRPGLTT VRQPMRRLGA VAAELLDERL
RDPSTPARSD VLPARLVVRP STTSAPPGGK P