| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3468 |
|---|
| Symbol | |
|---|
| ID | 7859242 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 3864607 |
|---|
| End bp | 3865164 |
|---|
| Gene Length | 558 bp |
|---|
| Protein Length | 185 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643867568 |
|---|
| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
|---|
| Protein accession | YP_002883472 |
|---|
| Protein GI | 229821946 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.88792 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGAGA CCGCGCCGCG CGCCGTCTCG GACGCCGCGC TCGCCCGGCG CGCCGCGCTC
GGTGACCGGG ACGCGTTCGC GCAGCTCGCA GACCGGCACG GCCCGGCGCT CTACCGGTAC
GTGCGCCGCC TCGTCCGCGA CGACGACCAA GCCGCGGACT GCCTGCAGGA GACGTTCCTC
GCCGCGTGGA TGTCGCTGCC GGGGTTCCGC GGCGACTCGA CGGTGCGGAC GTGGCTCTTC
GGCGTCGCGA CGCGCCAGGT CTACCGCTTC CGGTCGCGAT GGGTGCGCTA CCACGACCCG
CTGCCCGAGG ACCTCGCGCT CGTCGACCCC GGCGCACGGC CGGAGGACAT CGCTGTCGCG
GCCGGACTCC TGACGGCGTT GGAGGCGGGT CTGCGACGAT TGCCCCCGAC GCAGCGCGCA
TGCTGGCTCC TGCGAGAGGT CGAGGAGCTC AGCTACGAGG AGATCGCACT CGTGCTCGGG
ACGAGCACGG GGGCCGTCCG GGGCCAGCTG CACCGCGCCC GCGGCGCACT GTCGACGATG
CTGGAGGAGT GGCGATGA
|
|---|
| Protein sequence | MSETAPRAVS DAALARRAAL GDRDAFAQLA DRHGPALYRY VRRLVRDDDQ AADCLQETFL
AAWMSLPGFR GDSTVRTWLF GVATRQVYRF RSRWVRYHDP LPEDLALVDP GARPEDIAVA
AGLLTALEAG LRRLPPTQRA CWLLREVEEL SYEEIALVLG TSTGAVRGQL HRARGALSTM
LEEWR
|
|---|
| |