Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_3401 |
Symbol | |
ID | 7859174 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 3800829 |
End bp | 3801824 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643867500 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_002883405 |
Protein GI | 229821879 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.621344 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTGTACT TCCTGCGCCG GCTGGGGTTC TTCCTCGCCA CGCTGTGGGC GGCGGTGACG CTGAACTTCG TCATCCCCCG CCTGCAGCCG GGCGACCCCG CCGAGGCGCT CGTGCAACGG CTGACCGGTG AGGGCACCGC CCTGGACCCG CAACAGGTCC AGGCGGTGCG CCTCATGCTC GGCATCGAGG GCGAGGGCAT CGTCCAGCAG TACCTCGACT ACCTCGGCGC GGTGGTGCGA GGCGACTTCG GGCCGTCGTA CACGTACTTC CCGTACTCCG TGACCGAGGT CATCTCGCAG GCGTTGCCGT GGACGCTCGT GCTCGTCGGG ACGACGACGA TCATCTCGTT CGTCGTCGGC ACGCTGCTCG GCACGTGGGC GGCCTACCGC CGCGGCACGC GCGTGGACTC GGTGCTGACG CTCGGGTCGA CGTTCCTCTC GACGCTGCCG TTCTTCTGGA TCGCGCTCAT GCTCATCTAC GTCTTCGCGT TCCAGCTGCA GTGGTTCCCG GAGAGCGGCG GCTACGGGCC GGGATCCACC CCCGGCTGGA ACTGGACGTT CATCTCGGAC GCGTTCCAGC ACTCCGTGCT GCCGGCCCTG TCGCTGCTCA TCACGGGGCC GCTCGGCTGG ATCCTCGCGA TGCGCAACAA CATGGTGCAG ATGCTCGGCG AGGACCACAC GCGGTTCGCC CGCGCCCGCG GGCTCCGGGA CCGGCGCATC GCGCTCACCT ACGGGGGCCG GATCGCGATC CTGCCGAGCG TCACGGGGTT CGCCCTGGCG CTCGGGGGCC TGCTCGGCGG CACCCTCCTC GTGGAGACGA TCTTCAACTA CCCCGGGCTG GGCCGCCTGC TGCTGGAGTC GGTGAACAAC CGGGACTACC CGCTGCTCCA GGCGCTGTTC CTGCTCACGA CGACGGGCGT GCTCCTCGGC AACCTCATGG CCGACTTCCT GTACGGCGTC CTCGATCCAC GCGTCCGACG GGAGGTCGCG ACATGA
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Protein sequence | MLYFLRRLGF FLATLWAAVT LNFVIPRLQP GDPAEALVQR LTGEGTALDP QQVQAVRLML GIEGEGIVQQ YLDYLGAVVR GDFGPSYTYF PYSVTEVISQ ALPWTLVLVG TTTIISFVVG TLLGTWAAYR RGTRVDSVLT LGSTFLSTLP FFWIALMLIY VFAFQLQWFP ESGGYGPGST PGWNWTFISD AFQHSVLPAL SLLITGPLGW ILAMRNNMVQ MLGEDHTRFA RARGLRDRRI ALTYGGRIAI LPSVTGFALA LGGLLGGTLL VETIFNYPGL GRLLLESVNN RDYPLLQALF LLTTTGVLLG NLMADFLYGV LDPRVRREVA T
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