Gene Bcav_3393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3393 
Symbol 
ID7860359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3786222 
End bp3786851 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content75% 
IMG OID643867492 
Productlipolytic protein G-D-S-L family 
Protein accessionYP_002883397 
Protein GI229821871 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2755] Lysophospholipase L1 and related esterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0644196 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTCTCA CCATCCCGCG CGGCGGCACC GTCGTGCTCA CCGGAGACTC CATCACCGAC 
GCCGGCCGCC GCGAGGACGC GCGCGGGCTC GGCACGGGCT ACGCCGCGCT CGTCGCTGAC
ACGCTCGCCG AGCGCCACCC TGACGCCGGG CTGCGCGTGG TGAACACCGG GATCAGCGGC
AACAGGGTGG CCGACCTCCG CGGGCGCTGG GCCGACGACG TGCTCGCCCA CTCGCCCGCC
GTCGTCTCGG TCTTCATCGG CATCAACGAC ACGTGGCGCC GCTACGACTC GGACCTGGTC
ACGTCCGTCG CGTCCTACGA GGAGGACTAC CGGGCGCTGC TCGAGACGCT GCGCGACGCC
GGCGTCGGCA TCCTGCTCAT CGAGCCGTTC CTGCTGCCCG TCCGCGACGA CCAGTGGGCG
TGGCGCGAGG ACCTCGACCC CCGGATCCAG GTGGTGCGCC GCCTCGCCGC GGAGTTCGAC
GCCGGGCTGC TCGCGGCCGA CGGCCTCTTC GCGGAGACGG CGCGCGACCG CGGCGGCCCC
GAGCTCCTCG CCCCGGACGG CGTGCACCCC ACGCCGGAGG GCCACGCACT GCTCGCGAAC
GCGTGGCTGC GCCGGGTCGC CGTCGCTTGA
 
Protein sequence
MTLTIPRGGT VVLTGDSITD AGRREDARGL GTGYAALVAD TLAERHPDAG LRVVNTGISG 
NRVADLRGRW ADDVLAHSPA VVSVFIGIND TWRRYDSDLV TSVASYEEDY RALLETLRDA
GVGILLIEPF LLPVRDDQWA WREDLDPRIQ VVRRLAAEFD AGLLAADGLF AETARDRGGP
ELLAPDGVHP TPEGHALLAN AWLRRVAVA