Gene Bcav_3295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3295 
Symbol 
ID7861767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3652537 
End bp3653529 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content79% 
IMG OID643867395 
Productputative integral membrane protein 
Protein accessionYP_002883300 
Protein GI229821774 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.179488 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00096704 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACCGACG CCGAGGCACA GCGAGGGGCA GGGGCAGACG CAGGGCCGGA GGACGCGAGT 
GCGGCGCGGC CGGGCGAGGC GCAGGCGGGC GAGGCGCAGG CGGGCGCGGC CGCCGACGAG
GCGCAGACCG ACGAGGCGCG GGCGGGCGAG GCGCAGGCGG GCGAGTCGGC CGCCGGCGTG
GCGCGGCCGC AGGCGGCCGA CGACACCCCC CGCACGACGG ACCGCGTCCG GCAGGTCGCC
GTCGCCGCGA GCGCCGTGCT CGCCGTGGCC GGCTCCGCGC TCGGCTCGGG CGCCTTCGGA
GGCACGCAGA TCCAGGACGC GGCGGGCGGC GCGCTCGCCG CCGACGCGAC AGTCCTCGCG
CCCGGCTCCG GAGCCTTCGC GATCTGGACT GCCGTGTACC TCGGCCTGGT CGCCGTCGCC
GTCGTGCAGC TCCTGCCCGG GCGCGGGACG GACGAGGCTC ATCGCGCGAC CGGCTGGCTG
CTCGCCGCCT CGATGCTCCT CAACGCCGCC TGGATCCTGC TCGCCCAGGC GGGTCAGCTC
GTGCTGACGG TCGCCGTCAT CGTCGTGCTC GTGGTCGTGC TCGGCGCGCT CGCGCACCTC
CTGGTGACGC GTCCCGCGCG GCGCCGGCTC GACGTCGTCG TGCTCGAGGC GACCACGGGG
CTGTACCTCG GCTGGGCGAG CGTGGCGACG GCGGCCGACG TCGCGGCGAC GCTCACCGAC
GCCGGGCTGA CCGCCGAAGG GGCCGCGGAG CACGTCTGGG GAGTGGCCGT CGTCGCGCAG
GTCGCCGCGG TGGCCGTGGC CGCGTGCCTC GCGACGGCGA GCCGGCGCCT CCTCGCCGCA
GCGATCGGGA TCGCCGCGGC GTGGGGACTC GGCTGGATCG CCCTCGGCCG GCTGGCGGCG
GGACCCGAGT CGCCGCCGGT GGCGATCGCG GCGACTGTCG CTGCCCTGGT CGTGCTCGTC
GTCGCGGTCA CCGCCGTCGT CAGGCGGCGG TGA
 
Protein sequence
MTDAEAQRGA GADAGPEDAS AARPGEAQAG EAQAGAAADE AQTDEARAGE AQAGESAAGV 
ARPQAADDTP RTTDRVRQVA VAASAVLAVA GSALGSGAFG GTQIQDAAGG ALAADATVLA
PGSGAFAIWT AVYLGLVAVA VVQLLPGRGT DEAHRATGWL LAASMLLNAA WILLAQAGQL
VLTVAVIVVL VVVLGALAHL LVTRPARRRL DVVVLEATTG LYLGWASVAT AADVAATLTD
AGLTAEGAAE HVWGVAVVAQ VAAVAVAACL ATASRRLLAA AIGIAAAWGL GWIALGRLAA
GPESPPVAIA ATVAALVVLV VAVTAVVRRR