| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3290 |
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| Symbol | |
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| ID | 7861762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | + |
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| Start bp | 3645847 |
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| End bp | 3646605 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643867390 |
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| Product | major intrinsic protein |
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| Protein accession | YP_002883295 |
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| Protein GI | 229821769 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
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| TIGRFAM ID | [TIGR00861] MIP family channel proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.881341 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0169929 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTTCT CCACGATCGT GATACCGGAG GCCGCCGGCA CCGCCATGCT GGTGCTTCTC
GGGTGCGGTG TCGTCGCGAA TGTCGTCCTG CCGAGGACGA AGGGCTTCGA CGGCGGTTGG
CTGCTCGTCA ACTTCGGCTG GGGCCTGGCC GTGTTCGCCG GTGTGTACGT GGCGTTCAGC
ACGGGTGCGC ACATCAACCC GGCCGTGACG TTCGGCATCT GGGCGTCCGG GGCCGAGGAC
TTCTACGTCC CGCCGGAGGG AACCGAGGGC CAGGAGGCGA TCCCGGTCAC GGCGGGGAAC
GGCTTCGCGT ACATCTTCGC TCAGATGCTC GGGGCCTGTA TCGGCGCGAT CGTCGTCTAC
CTCGCGTACA AGAAGCACTT CGACCAGGAC GCCGACCCCG CCTCGAAGCT CGCCGTGTTC
TCCACCGGCC CCGCGATCCG CTCGTACGGG TGGAACCTCG TGACGGAGAT CGTCGGCACG
TTCGTCCTCG TGTTCGTGAT CCTGCACTTC GCGAAGACGC CCTCCGGGCT CGGACCGCTC
GCCGTCGCGC TCCTCGTGCT CGGTATCGGC GCGAGCCTCG GTGGCCCGAC GGGGTACGCG
ATCAACCCCG CGCGTGACCT CGGTCCGCGC ATCGCCCACG CGCTGCTGCC CATCAAGGGC
AAGGGTTCGA GCGACTGGTC CTACGCCTGG GTCCCGGTGC TCGGCCCGAT CCTCGGCGGC
GTCCTCGGCG GACTCGCGGC TGCGGGTCTC ACGAGCTGA
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| Protein sequence | MDFSTIVIPE AAGTAMLVLL GCGVVANVVL PRTKGFDGGW LLVNFGWGLA VFAGVYVAFS
TGAHINPAVT FGIWASGAED FYVPPEGTEG QEAIPVTAGN GFAYIFAQML GACIGAIVVY
LAYKKHFDQD ADPASKLAVF STGPAIRSYG WNLVTEIVGT FVLVFVILHF AKTPSGLGPL
AVALLVLGIG ASLGGPTGYA INPARDLGPR IAHALLPIKG KGSSDWSYAW VPVLGPILGG
VLGGLAAAGL TS
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