Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_3272 |
Symbol | |
ID | 7861744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 3627300 |
End bp | 3628847 |
Gene Length | 1548 bp |
Protein Length | 515 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643867372 |
Product | L-arabinose isomerase |
Protein accession | YP_002883277 |
Protein GI | 229821751 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2160] L-arabinose isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0251873 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGCGT CACCCGCGGT GCCCGCCACC GACCCGACCG CCCAGGACCC GTTCGCCGGT CGTGAGATCT GGTTCCTCAC CGGCAGCCAG CACCTGTACG GGCCGGAGGT GCTCGAGCAG GTGGCCTCCC AGTCGGGATC GATCATTGCG ACGCTCGACG ACGCCGCCGA GATCCCGGTG CGGATCGTCG CCAAGCCGGT GCTCACGGAC ACCGAGGCGA TCCGGCGCAT CGCGGACGAG GCGAACGCGG ACCCGGCGTG CGTCGGCGTC ATCGCGTGGA TGCACACGTT CTCCCCGGCG AAGATGTGGA TCACCGGGCT GGACGCGCTG CGGACGCCGC TGCTGCACCT GCACACGCAG GCGAACGTCG GCCTCCCGTG GGCCGACATC GACATGGACT TCATGAACCT CAACCAGGCC GCGCACGGGG ACCGCGAGTT CGCGTACGTC GCGACGCGGC TCGGCGTGGC CCGCAAGACG GTGGTCGGGC ACGCGTCCGA CGCGCGGGTG CGCAGCGAGG TCGGCACGTG GGCGCGGGCG GCGACGGCGT GGGCGCACGT GCGCGGGCTC AAGCTCGCCC GGTTCGGCGA CAACATGCGG TTCGTCGCCG TCACCGAGGG TGACAAGACG GAGGCGGAGC GGGTCTTCGG CGTCCAGGTC AACACGTGGG GCGTGAACGA CCTGGTGGAG CGGGTCGACG CCGCACCCGA GGGCATCGTC AACGCGCTCG CCGCCGAGTA CGAGCTGGCC TACGACGTCG CCCCCGAGCT GCGCCGCGGC GGCGAGCGGC ACGAGTCCCT GCGCTACGCC GCCCGCATCG AGGCCGGCCT GCGCACGTTC CTCGCGGAGG GTGGGTTCGG CGCGTTCACC ACGAACTTCG AGGACCTCGG CGGGCTGCGG CAGCTCCCGG GGCTCGCCGT GCAGCGCCTC ATGGCGGACG GCTACGGCTT CGGCGCCGAG GGCGACTGGA AGACGGCGGT GCTCGTGCGC GCCGCGAAGG TCATGGGCCA CGGGCTGCCC GGCGGCGCCT CCCTCATGGA GGACTACACG TACCACCTGA CGCCGGGGGA GGAGAAGATC CTCGGCGCCC ACATGCTCGA GATCTGCCCG TCGCTGACGA CGGCGAAGCC GCGCGTCGAG ATCCACCCGC TCGGCATCGG CGGGCGCGAG GACCCGGTGC GCCTCGTGTT CGACACCGAC CCCGGCCCGG GCATCGTCGT CTCGCTCGCC GACCTGCGCG AGCGCTTTCG TCTTGTGGCG AACGTCGTCG ACGTCGTCGG CCCGGACGCC CCGCTGCCGA ACCTTCCCGT GGCCTCGGCC GTGTGGGTCC CGGAGCCGGA CTTCGCGACG TCGGCCCAGG CGTGGCTGAC GGCCGGCGGG GCGCACCACA CCGTGCTCAC CACGGCGGTC GGCGCCGAGG CGTGGGAGGA CTTCGCCGAG ATCGCCCGCA CCGAGCTCGT GCTCATCGAC CGAGACACGC GGCTGCGCGA GCTGCGCAAG GAACTACGGT GGAACGCCGC CTACTACCGC CTCGCCCAAG GGATGTGA
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Protein sequence | MTASPAVPAT DPTAQDPFAG REIWFLTGSQ HLYGPEVLEQ VASQSGSIIA TLDDAAEIPV RIVAKPVLTD TEAIRRIADE ANADPACVGV IAWMHTFSPA KMWITGLDAL RTPLLHLHTQ ANVGLPWADI DMDFMNLNQA AHGDREFAYV ATRLGVARKT VVGHASDARV RSEVGTWARA ATAWAHVRGL KLARFGDNMR FVAVTEGDKT EAERVFGVQV NTWGVNDLVE RVDAAPEGIV NALAAEYELA YDVAPELRRG GERHESLRYA ARIEAGLRTF LAEGGFGAFT TNFEDLGGLR QLPGLAVQRL MADGYGFGAE GDWKTAVLVR AAKVMGHGLP GGASLMEDYT YHLTPGEEKI LGAHMLEICP SLTTAKPRVE IHPLGIGGRE DPVRLVFDTD PGPGIVVSLA DLRERFRLVA NVVDVVGPDA PLPNLPVASA VWVPEPDFAT SAQAWLTAGG AHHTVLTTAV GAEAWEDFAE IARTELVLID RDTRLRELRK ELRWNAAYYR LAQGM
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