Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_3201 |
Symbol | |
ID | 7857958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 3552903 |
End bp | 3553904 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 643867302 |
Product | RarD protein, DMT superfamily transporter |
Protein accession | YP_002883207 |
Protein GI | 229821681 |
COG category | [R] General function prediction only |
COG ID | [COG2962] Predicted permeases |
TIGRFAM ID | [TIGR00688] rarD protein |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.786904 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.510387 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCTCCTG CGTCACCGCC GGACCGGTGG GGCGTCCCGC TCGGCGTCTC CGCCTACGTG CTGTGGGGCG TGCTCCCGCT GTACCTCGCG CTCCTCGAGC CCGCCGGGCC GGTCGAGATC ATCGCCCACC GGGTCGTGTG GAGCCTGCTG TTCTGCCTGG TGGGCCTCGC TCTCGCCCGC GGGATGCGCT CGTACCTCAC GGTGCTGCGC ACGCCCCGGC TGCTGCGCCC GCTCGCGGTG GCCGCCGTCC TCGTCGGCGT GAACTGGACG GTGTTCGTGT TCGCCGTCCA GGCCGGCCAC GTGATCGACG CCGCCCTGGG CTACTTCATC AACCCGCTGG TCACGGCGCT GCTCGCCGTC CTCGTCCTGC GCGAGCGGCT CCGCCCCGTG CAGTGGGCGG CCCTCGGGCT CTCCGGCGTC GCCGTCGTCG TCATCACCGT CGGCTACGGC ACGCTGCCCT GGGTCGCGCT CGCTCTGGCG GGGTCGTTCG GGCTCTACGG GCTCGTGAAG AACCGCGTCG GTCGCGACGT CGGCGCCCTG CCCGGCCTGG CGGCCGAGAC GACCGTCCTC GCGCCTCTCG CGCTGGGCTA CCTCGTCTGG CTCGCCCTGA CCGGGACGGC CGCTTTCGGT CAGCCGGGAG CGGACGCCAC TCCGGTGGGG TACGCCCTCC TGCTCATGGC CGCCGGACCC GCGACCGCGA TCCCGCTCCT GCTCTTCGCC GGGGCGGCGC GTCGCCTGCC GCTCGCCTCC ATGGCGTCGT TGCAGTACCT GGCGCCGCTC ATGCAGTTCG GGCTCGGCGT CGTCGTCTTC GGCGAGGAGA TGCCGCTCGC CCGGTGGGTC GGGTTCGTGC TCGTGTGGGT GGCGCTCGCG GCGCTCACCG TCGACGGCCT CCGCGCGGCG CGCGCGACCC GGCTGCTGCG CCGGAAGGCT CAGGAGCCCG CGGAGCCCGA CGGCCCCGAC GGCCCGGCCG TCAGCGCCGG TTCGCCGACG GCCGACGCGT GA
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Protein sequence | MPPASPPDRW GVPLGVSAYV LWGVLPLYLA LLEPAGPVEI IAHRVVWSLL FCLVGLALAR GMRSYLTVLR TPRLLRPLAV AAVLVGVNWT VFVFAVQAGH VIDAALGYFI NPLVTALLAV LVLRERLRPV QWAALGLSGV AVVVITVGYG TLPWVALALA GSFGLYGLVK NRVGRDVGAL PGLAAETTVL APLALGYLVW LALTGTAAFG QPGADATPVG YALLLMAAGP ATAIPLLLFA GAARRLPLAS MASLQYLAPL MQFGLGVVVF GEEMPLARWV GFVLVWVALA ALTVDGLRAA RATRLLRRKA QEPAEPDGPD GPAVSAGSPT ADA
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