Gene Bcav_3193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3193 
Symbol 
ID7857950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3547089 
End bp3547976 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content72% 
IMG OID643867294 
Productheat shock protein HtpX 
Protein accessionYP_002883199 
Protein GI229821673 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.238785 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.244008 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTACGCC GCCACTTCAA CGGCCTGAAG ACTGTCGGGT TGTTCGGTGT GCTGTGGGCG 
ATCCTCCTGG GGATCGGCGC GCTCATCGCG AACGGCACGG GCCAGGCGTC GTTCATCTGG
CTGTTCGCCG GGATCGGTGT GCTCTCGACG TTCGTGGGCT ATTGGCGGTC CGACAAGATC
GCCATCGCTG CGATGCGGGC GCGGCCGGTC AGCGAGGCCG AGGCGCCGGC CATGTATCGG
ATCGTCCGCG AGCTCTCGAC CGCCGCCCGC CAGCCGATGC CCCGGCTGTA CGTCTCCCCG
ACGGCGTCGC CCAACGCGTT CGCGACGGGT CGCAACCCGC GCAACGCCGC GGTGTGCTGC
ACCGAGGGGA TCCTCGCGAT CCTCGACGAA CGTGAGCTGC GGGGCGTGCT CGCGCACGAG
CTGATGCACG TGTACAACCG CGACATCCTC ACGTCGTCGG TCGCGGCAGC CGTCGCCGGG
GTCATCTCCT CGGTGGCGCA GTTCTTCCTC TTCTTCGGCG GTGGCGGCTC GAGCTCCGAC
CGCGGCGGCA ACCCGATCGC TCTCATCGGT GCGCTGCTCG CCGCGTTGCT CGCCCCGTTC
GCGGCCGCGC TCATCCGGCT CGCGATCTCG CGTACCCGCG AGTACGACGC GGACGCCGAC
GGCGCCCGGC TCACCGGGGA GCCGCTGGCG CTCGCGTCGG CCCTGCGGAA GCTCGAGGCC
GGCACGGCGG CTCGACCGTT GGCGCCGACC ACGCGGCTCG AGAACGTCTC CCACCTGATG
ATCGCGAACC CGTTCCGGGC CGCCGGTGTG GCGCGGCTGT TCGCCACCCA CCCGCCCATG
GCGGAGCGCA TCGCGCGCCT CGAGCAGCAG GCGGGCTACC CGCGCTGA
 
Protein sequence
MVRRHFNGLK TVGLFGVLWA ILLGIGALIA NGTGQASFIW LFAGIGVLST FVGYWRSDKI 
AIAAMRARPV SEAEAPAMYR IVRELSTAAR QPMPRLYVSP TASPNAFATG RNPRNAAVCC
TEGILAILDE RELRGVLAHE LMHVYNRDIL TSSVAAAVAG VISSVAQFFL FFGGGGSSSD
RGGNPIALIG ALLAALLAPF AAALIRLAIS RTREYDADAD GARLTGEPLA LASALRKLEA
GTAARPLAPT TRLENVSHLM IANPFRAAGV ARLFATHPPM AERIARLEQQ AGYPR