Gene Bcav_3177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3177 
Symbol 
ID7859462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand- 
Start bp3532297 
End bp3532911 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content73% 
IMG OID643867275 
Producttranscriptional regulator, PadR-like family 
Protein accessionYP_002883183 
Protein GI229821657 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.556918 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.03966 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTGC GGAACGGGCT GATCGCGCTG CTGAGCGAGC GTCCGATGGG CGTGTACGAG 
CTTCGCAAGG AGTTCGACGC GCGCACCGGC GGAACCTGGC CGGTCAACAT CGGTCAGGTG 
TACGCCACCG TGCAGCGGCT CGTCCGCGAC GAGCTCGTCG AACCCCTGCC GGAGGACTAC 
GAGGTCGCCA GCGACGTCGA GTTCTTCCGG CTGACCGAGG CGGGCTATGT CGCGGCCGAG 
GCGTGGTGGG CCGCCCCGGT CGACCGGTCG GCACCGGGCA GGGACGAGCT CGTCATCAAG 
CTCGCGCTGG CGGTGTCCGC GCCCGGGGTC GACGTCGGCG CCGTCGTGCA GGCCCAGCGG 
GCGGAGTCCA TGCGCGCGCT CCGTGACTTC ACGCGCCTCA AGGCCGGGGG GCCGGCGCCG 
GAGCAGGCGG ACCGCGACAC GCTGGCCTGG TCGCTCGTGC TCGACCACCT CACCTTCGCC 
GCCGAGGCAG AGGTGCGATG GCTCGACCAC GTCGAGGTCG TCGTCACCCG TGCCGCGCAC 
GGCGTGGTCG CGCTGTCGCA GGGGGACAGC GCGACCGACG ACGCCACCGC CGTCACGAAC 
CGGGCACGCC GGTGA
 
Protein sequence
MSVRNGLIAL LSERPMGVYE LRKEFDARTG GTWPVNIGQV YATVQRLVRD ELVEPLPEDY 
EVASDVEFFR LTEAGYVAAE AWWAAPVDRS APGRDELVIK LALAVSAPGV DVGAVVQAQR 
AESMRALRDF TRLKAGGPAP EQADRDTLAW SLVLDHLTFA AEAEVRWLDH VEVVVTRAAH 
GVVALSQGDS ATDDATAVTN RARR