Gene Bcav_3164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3164 
Symbol 
ID7859449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3518708 
End bp3520090 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content73% 
IMG OID643867262 
Productaspartate aminotransferase 
Protein accessionYP_002883170 
Protein GI229821644 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.808038 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.139624 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGGGA CCACCGGGGG TCCACTGTAC GCGAAGCGGA CGGTCGCGGT CGAACCGGTC 
CACGGGTGCC GAGCGGGCTG CCCGCCGGGA GACGACCGGG CCGCGGACGG GCCGGCGTCT
GCCACGATAG AGCACGTGAG CGACGTCACC GCGCAGCCCT CCGCCCCCGT CCACGCCGGC
ACCAGGAACC GTGTCTCCGC GCGCCTCGCC GCCATCGCGG AGTCGGCGAC GCTCGCCGTC
GACGCGAAGG CGAAGGCGCT CAAGGCCCAG GGCCGGCCGG TCATCGGGTT CGGCGCGGGC
GAACCGGACT TCCCCACGCC TGACTACATC GTCGCCGCCG CTGTCGCCGC CGCGCAGGAT
CCCGCCAACC ACCGGTACTC CCCCGCAGCC GGGCTCCCCG CGCTGCGCGA GGCGGTCGCC
GCGAAGACGC TGCGCGACTC CGGCTACGAG GTGTCGCCGT CGAGCGTGCT CGTGACGAAC
GGCGGGAAGC AGGCCGTGTA CCAGGCGTTC GCCGCGATCG TCGACCCCGG CGACGAGGTG
CTGCTCCCGG CTCCGTACTG GACGACCTAC CCGGAGGCCG TCCGGCTGGC GGGCGGCGTG
CCGGTCGAGG TCTTCGCCGG CGCGGACGCC GGGTACCTCG TGACCGTGGA GCAGCTGGAG
GCGGCGCGGA CCCCCGCGAC GAAGGTGCTG CTGTTCTGCT CGCCGTCGAA CCCCACCGGC
GCCGTGTACT CGCCCGAGCA GACGGCGGCG ATCGGCGCCT GGGCGCTCGA GCACGGGATC
TGGGTCATCA CCGACGAGAT CTACGAGCAC CTCGTGTACG ACGACGCGGT GTTCACCCCG
ATCGTGCGCG CCGTGCCGGA GCTGGCGGAC ACGTCGATCG TGCTCAACGG CGTCGCGAAG
ACCTACGCGA TGACCGGGTG GCGCGTCGGC TGGATGATCG GCCCGACCGA CGTCGTCAAG
GCCGCGACCA ACCTGCAGTC GCACCTCACG TCGAACGTCG CGAACGTCTC CCAGCGGGCT
GCGATCGCCG CGCTGACCGG GGACCTGTCC GCCGTCGAGC ACATGCGCGC CGCCTTCGAC
CGGCGCCGCC GCACGATCGT GGCGAAGCTG TCGGCGATCG ACGGCGTCGT GTGCCCGACG
CCGAAGGGCG CGTTCTACGC GTACCCGAGC GTCGAGGGGG TGCTGGGGCG CACGATCCGC
GGCGTCACGC CGACGACGTC CGCAGAGCTC GCCTCGCTCA TCCTCGACGA GGTCGAGGTC
GCCGTGGTGC CCGGCGAGGC GTTCGGCCCG AGCGGGTACC TGCGCTTCTC CTACGCCCTG
GGCGACGACG ACCTGGCCGA AGGCGTCGAC AGGGTCGCCG CCCTGCTCGC CGAGGCCGGC
TGA
 
Protein sequence
MVGTTGGPLY AKRTVAVEPV HGCRAGCPPG DDRAADGPAS ATIEHVSDVT AQPSAPVHAG 
TRNRVSARLA AIAESATLAV DAKAKALKAQ GRPVIGFGAG EPDFPTPDYI VAAAVAAAQD
PANHRYSPAA GLPALREAVA AKTLRDSGYE VSPSSVLVTN GGKQAVYQAF AAIVDPGDEV
LLPAPYWTTY PEAVRLAGGV PVEVFAGADA GYLVTVEQLE AARTPATKVL LFCSPSNPTG
AVYSPEQTAA IGAWALEHGI WVITDEIYEH LVYDDAVFTP IVRAVPELAD TSIVLNGVAK
TYAMTGWRVG WMIGPTDVVK AATNLQSHLT SNVANVSQRA AIAALTGDLS AVEHMRAAFD
RRRRTIVAKL SAIDGVVCPT PKGAFYAYPS VEGVLGRTIR GVTPTTSAEL ASLILDEVEV
AVVPGEAFGP SGYLRFSYAL GDDDLAEGVD RVAALLAEAG