| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3160 |
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| Symbol | |
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| ID | 7859444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | - |
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| Start bp | 3516054 |
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| End bp | 3516770 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643867257 |
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| Product | ribosomal protein L1 |
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| Protein accession | YP_002883166 |
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| Protein GI | 229821640 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.496068 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.206569 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCGC AGAGCAAGAA CTACCGCAAG GCCGCCTCGG CGATCGACCG CGACCGGCTG
TACGCCCCCC TCGAGGCCGT GCGCCTCGCG AAGGCCGGGG CGAGCACGAA GTTCGACTCG
ACGGTCGAGG TCGCGTTCCG CCTCGGCGTC GACCCCCGCA AGGCGGACCA GATGGTCCGC
GGCACGGTGA ACCTGCCGCA CGGCACGGGC AAGACCGCCC GTGTCCTCGT CTTCGCCGTC
GGCGAGCGTG CCGAGCAGGC CCGCGCCGCC GGCGCCGACG AGGTCGGCGG CGACGAGCTC
ATCGAGAAGG TGGCGGGCGG CTACGTCGAC TTCGACGCCG CCGTGGCGAC GCCGGACCTC
ATGGGCAAGG TCGGCCGCCT CGGCCGCGTG CTCGGCCCGC GTGGCCTCAT GCCGAACCCG
CGCACCGGCA CGGTGACGAT GGACGTGGCG AAGGCCGTCG AGGAGATCAA GGGCGGGAAG
ATCGACTTCC GCGTCGACAA GCACGCCAAC CTCCACGTCG TCGTCGGCAA GGCGTCGTTC
GACGAGACGG CGCTCGTGGA GAACTACGCG TCCGTGCTCG ACGAGGTGCT CCGGCTCAAG
CCGTCGTCCT CGAAGGGCCG GTACATCGTC AAGGCCACGC TGTCGACGAC GATGGGCCCG
GGCATCCCGC TGGACGCGTC GAAGACCCGC AACCTGACGG GCGAGGACGC CGCCTGA
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| Protein sequence | MTAQSKNYRK AASAIDRDRL YAPLEAVRLA KAGASTKFDS TVEVAFRLGV DPRKADQMVR
GTVNLPHGTG KTARVLVFAV GERAEQARAA GADEVGGDEL IEKVAGGYVD FDAAVATPDL
MGKVGRLGRV LGPRGLMPNP RTGTVTMDVA KAVEEIKGGK IDFRVDKHAN LHVVVGKASF
DETALVENYA SVLDEVLRLK PSSSKGRYIV KATLSTTMGP GIPLDASKTR NLTGEDAA
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