Gene Bcav_3142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3142 
Symbol 
ID7859426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3493804 
End bp3494469 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content73% 
IMG OID643867239 
Productribosomal protein L4/L1e 
Protein accessionYP_002883148 
Protein GI229821622 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0088] Ribosomal protein L4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.083105 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCCG AGAGCACACT GACCGTCGAC GTCATCGACG CGAAGGGCAA GAAGTCCGGC 
ACCGCCGACC TGCCCGCCGA CGTGTTCGAC GTCCAGACGA ACGTGCCCCT GATCCACCAG
GTCGTCGTCG CGCAGCTGGC GGCGGCACGG CAGGGGACGC ACAAGACCAA GACGCGCGGC
GAGGTCCGCG GCGGCGGCAA GAAGCCGTAC CGCCAGAAGG GCACCGGTCG CGCCCGCCAG
GGTTCGACCC GCGCTCCGCA GTTCGCCGGC GGTGGCGTCG TGCACGGGCC CGTCCCGCGC
GACTACAGCC AGCGGACCCC GAAGAAGATG AAGGCCGCCG CGCTGCGTGG CGCGCTCAGC
GACCGCGCGC GGGCCGACCG CGTGCACGTG GTCTCCGGGT TCGTCGCCGA CGCGCCGTCG
ACCAAGGCGG CCCTCGCGGT GCTCGGCCAG GTCACGGAGG CGGAGCGGGT GCTGGTCGTG
CTCGAGCGCA CCGACACCAC CGCGTGGCTC AGCCTGCGCA ACGTGCCGGC TGTGCACCTC
ATCCACCCTG ACCAGCTCAA CACGTACGAC GTCCTCGTCA GCGACGACGT CGTCTTCACC
CGCGGCGCGC TCGAGCAGTT CCTCGCTCCG GCCGCCGGCG GCGACGCCGA GGAGGCCGGC
AAGTGA
 
Protein sequence
MAAESTLTVD VIDAKGKKSG TADLPADVFD VQTNVPLIHQ VVVAQLAAAR QGTHKTKTRG 
EVRGGGKKPY RQKGTGRARQ GSTRAPQFAG GGVVHGPVPR DYSQRTPKKM KAAALRGALS
DRARADRVHV VSGFVADAPS TKAALAVLGQ VTEAERVLVV LERTDTTAWL SLRNVPAVHL
IHPDQLNTYD VLVSDDVVFT RGALEQFLAP AAGGDAEEAG K