Gene Bcav_3128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3128 
Symbol 
ID7859412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3487558 
End bp3488097 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content69% 
IMG OID643867225 
Productribosomal protein L6 
Protein accessionYP_002883134 
Protein GI229821608 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0097] Ribosomal protein L6P/L9E 
TIGRFAM ID[TIGR03654] ribosomal protein L6, bacterial type 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGCA TCGGGAAGAT CCCCGTCCAG GTCCCGTCCG GCGTCGACGT CGACATCGCT 
GACCGCGTGG TGACGGTGAA GGGCCCCAAG GGCACCCTCA CGCACCGCGT GCCGGCGCCG
ATCGTCGTCG CACGCGGCGA CGACGGTGCC CTGGTCGTCA CGCGTCCGGA CGACGAGCGC
ACGTCGCGCT CGCTCCACGG CCTGACGCGC ACGCTGCTCG CGAACCTCGT CACCGGGGTG
ACGCAGGGCT ACCAGAAGAA CCTCGAGATC GTCGGTACCG GGTACCGCGT GACCGCCAAG
GGGAGCTCGC TCGAGTTCGC GCTCGGTTTC AGCCACCCCG TGACGGTGAG CGCCCCCGAG
GGCATCACCT TCGCCGTCGA GTCGCCGACC AAGTTCTCGG TCGCCGGCAT CGACAAGCAG
CAGGTGGGCG AGGTCGCCGC GAACATCAGG AAGATCCGCA AGCCCGAGCC CTACAAGGGC
AAGGGCGTGC GTTACGCGGG CGAGCAGGTC CGCCGCAAGG TCGGAAAGGC TGGGAAGTAG
 
Protein sequence
MSRIGKIPVQ VPSGVDVDIA DRVVTVKGPK GTLTHRVPAP IVVARGDDGA LVVTRPDDER 
TSRSLHGLTR TLLANLVTGV TQGYQKNLEI VGTGYRVTAK GSSLEFALGF SHPVTVSAPE
GITFAVESPT KFSVAGIDKQ QVGEVAANIR KIRKPEPYKG KGVRYAGEQV RRKVGKAGK