| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3098 |
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| Symbol | |
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| ID | 7858558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | - |
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| Start bp | 3456686 |
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| End bp | 3459466 |
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| Gene Length | 2781 bp |
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| Protein Length | 926 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 643867195 |
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| Product | transcriptional regulator, SARP family |
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| Protein accession | YP_002883104 |
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| Protein GI | 229821578 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.312417 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGGTACG AGGTGCTCGG CGAGCTGGGC GTCATCGACG ACGACGACGG GGGCGGCGGG
CTGGTGCCGG TCCCGGCGGG TCGGCAGCGG CTGCTCCTGG CGCGTCTGGT GGCGGCGGTG
CCGCGGCCGG TCCCGGTGGA CGCGCTGGTG GAGGATCTGT GGCCGGGGGG TGACGGGTCG
CGTTCGGCGC TCCAGGTGAT CGTCCACCGG TTGCGGCGTC GGATCGGGGA GGACCGCCTC
GTCCTCGACG TGAGCGGGTA CCGGTTGGTC GCGGACCCCG GGGACGTGGA CGCCGTCGTG
TTCGTGGAGG CGGTGCAGGC CGCGTGGTCC GACGTCGACC TCGATCCGGC GCGGGCGATC
GCCACGCTGG AGGGGGCACT TGCGCTGTGG CGCGGGTCGG CCTACGACGG GATCGGCCTG
GAGAGCGAGA CGCTCGCGAC GGAGGCGGTC CGGCTCGAGG GTCATCGGCT GGACGCCGAG
GAGGCGCGGT TCTCGGCGTC GCTGGCGCTC GGCCGGTCTG CGGAGCTCGT GGGGGAGCTG
CGTGAGGTGG TGGCGGCGCA CCCGTTGCGG GAGAGGTTCC ACGCGCAGCT GATGCTGGCG
CTGTACCGGT CGGGGCGCAC CGCCGACGCG CTGGACGCCT ACCGGACGGC GCGCGGCGTG
CTGGTGGAGG AGCTGGGGTT GGAGCCGGGG ACGGAGCTGC GGGACCTGGA GCAGGCGATC
CTGGTCGAGG ACCCGGTGCT CTCGGCCCCG CCGGCGCCGT TCGCGCGTCC GGATGCGCCG
GTCCGCCCGG CGCAGCTGCC GCCGTCGGAC CCGGCGTTCG TCGGTCGCGA CGACGACGTC
GCGGTCCTCA CCCGGGCGCT GACGAACGGC GGGCGCGTGG TCGCGATCGA CGGACCCGGC
GGAGTCGGGA AGTCCGCGCT CGCGCTGCAC GCCGCACACG CCGTCGCCGA GGAGTTTCCG
GGCGGGGTCC TCTACGCGAA CCTGCGCGGC GCCACACCCG GCGTGACCGC GCGCGACCCG
GCGGTGGTGC TGGAGCGGTT CCTGCACGCG TTGGGCGTCA CGACGGCGGG CACCGGGGAC
GTCGACGACG CCGCCGCCGA GCTCCGTACC AGGACCACCG GCGCGGGGGT GCTCGTCGTG
CTCGACGACG CCGCCTCGCC CGCGCAGGTG CAGCCGCTCC TGCCCGGCGA CGGGTCCGCG
GCGGTGGTGA CGTCGCGTCC CGTGCTCACG GGCTTCACCG CTTCCGCCCG CGTGCACCTG
GACGTCGTCG ACGAGGAGGT GGGCGTCCGC ATGCTGGCGC AGATCCTCGA GGACGACCGG
GTCGGGGCCG AGCCCGAGGC CGCGGCCAAG ATCGTCGCGG CCTGCGGGCG GTTGCCACTG
GCGATCCGGA TCGTCGGCGC CCAGCTGCTC GGTGCGCCGC GTCGGCGCCT CGCCGCGACG
GCCGAGCGGC TCGGTGACTC GCGGGCGCGG CTGGACGAGC TGGCGGCCGA CGACCTCGCG
GTGCGCTCGT CCCTCGAGCT CGGTCTGTCG GCGGTCTCCG GGGAGGCGGC CACGCTGTTC
GCGTATCTCG GCGTCGTCCC GTTGCCGAGC GTGACGGCCG CCGCGGTCGC GCGCCTCGCG
GACCTGCCGC TCGGCGTGGC CCGCCGCCGG TTGGACGACC TCGCGCGGGC GCGCATGCTC
GTGGAGCTCG GGGACGAGAC GTTCGCCATG CACGACCTGG TGCGCCTCGT CGCCGGCGAA
CGGGCGACGG CGGCCCTCGA CGACGAGCAG CGCCGCGCGG CCGTCCTCCG CCTGTACCGG
CACTACCTCG CGTCTGCGCG AGCCGTGGCA CTGGCGATGG ACCCCGACGT CTGGGAGGTG
CGGCTCGCCC TCGGTGAGGA GACCGATCCC CAGGCCGACC TGCCGGTGAC CGTCGCCGAC
GGCATCGCCG CCGCCCACTG GGTAACCGGC GAGATCGCGA CAGTCGCCGC CGTCGCGCAG
GCGACGCTCG CCGCCACCCA CGACCGGAGC GACGTCGCGG CGCTCCTGGC TCCGCTCTTC
GCGGCGATCC GCAGTCAGGG GATGGGAGCC TCGGCGGCGG AGCTCTACGT CCCCTTCGTC
GAGGCGCCCG ACGCGCGGAC GAGGGCCGAC GTGCTCATGC TGCTGGACTC CGCCGTCATG
CGTGAGGCAC CGGGTGCCAT GGCTCGGGCC GCCGAGCGGC CGCTGGCCGC GGCGCGGGCG
CTGGGCGACG ACGAGATGGT CGCGCACTGC CTCAACGTCC TGGCGATCGG GCTCACCCGG
GACGGCAGGC ACACCGACGC CCTCGAGCGG TACCGCGAGG CCGTCGACAT CGCCACGGGA
GCGGGCCTCG AGCACGCCCG GCGCACGGTC ATGCCGAACC TCGCGAAGTC GCTCGGGCAC
CTCGGCCGGC ACGAGGAGGC GGTCACGCTC CTCGAGAGTC AGCTGGAGGG TCTCGAGGGA
CGGCTGCGTG CCCATCATCT CGGGCGCCTC GCGGGGAGCC ATCTGGCCGT GGGGCGGCCC
GAGGCGGCGC TCCCGCTCTA CTCCGACGCG ATCGAGCAGC TCACTCGCTC CGGGCACACC
CTGCTCGTCG CCATCTACAC CTGGCACCAC GCGTCAGCCG TGAAGCGGCT CGGGCGCCTC
GACGAGGCTC AGGAGCTTCG ACGGCGCTCC CTCGACCTCG TCGTCGGCGT CGGACGGATC
ACCGCCGAGG AGGCCGACCG GATCCTCGCG GACGACCCGC CGGACGAACC CGAGGAGCTC
GATGTCTTCC GCCAGATCTG A
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| Protein sequence | MRYEVLGELG VIDDDDGGGG LVPVPAGRQR LLLARLVAAV PRPVPVDALV EDLWPGGDGS
RSALQVIVHR LRRRIGEDRL VLDVSGYRLV ADPGDVDAVV FVEAVQAAWS DVDLDPARAI
ATLEGALALW RGSAYDGIGL ESETLATEAV RLEGHRLDAE EARFSASLAL GRSAELVGEL
REVVAAHPLR ERFHAQLMLA LYRSGRTADA LDAYRTARGV LVEELGLEPG TELRDLEQAI
LVEDPVLSAP PAPFARPDAP VRPAQLPPSD PAFVGRDDDV AVLTRALTNG GRVVAIDGPG
GVGKSALALH AAHAVAEEFP GGVLYANLRG ATPGVTARDP AVVLERFLHA LGVTTAGTGD
VDDAAAELRT RTTGAGVLVV LDDAASPAQV QPLLPGDGSA AVVTSRPVLT GFTASARVHL
DVVDEEVGVR MLAQILEDDR VGAEPEAAAK IVAACGRLPL AIRIVGAQLL GAPRRRLAAT
AERLGDSRAR LDELAADDLA VRSSLELGLS AVSGEAATLF AYLGVVPLPS VTAAAVARLA
DLPLGVARRR LDDLARARML VELGDETFAM HDLVRLVAGE RATAALDDEQ RRAAVLRLYR
HYLASARAVA LAMDPDVWEV RLALGEETDP QADLPVTVAD GIAAAHWVTG EIATVAAVAQ
ATLAATHDRS DVAALLAPLF AAIRSQGMGA SAAELYVPFV EAPDARTRAD VLMLLDSAVM
REAPGAMARA AERPLAAARA LGDDEMVAHC LNVLAIGLTR DGRHTDALER YREAVDIATG
AGLEHARRTV MPNLAKSLGH LGRHEEAVTL LESQLEGLEG RLRAHHLGRL AGSHLAVGRP
EAALPLYSDA IEQLTRSGHT LLVAIYTWHH ASAVKRLGRL DEAQELRRRS LDLVVGVGRI
TAEEADRILA DDPPDEPEEL DVFRQI
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