| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3028 |
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| Symbol | |
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| ID | 7860139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | + |
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| Start bp | 3378150 |
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| End bp | 3378827 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 643867125 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_002883034 |
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| Protein GI | 229821508 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.211566 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000266978 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGAGCGCGC GGGCCGACGC CGTCCGCATC GTCCTCGTCG ACGACCAGGT GCTGCTCCGC
GAGGGCATCG CGACGATCCT CGGCGCGCAG CCCGGCCTCG AGGTCGTCGG GCAGGCGGGC
TCGGGTGCGG AGGCGCTCGA CGTCGTCGCG GGCACACAGC CCGACGTCGT CTGCATGGAC
GTGGAGATGC CCGGGATGGA CGGCATCGAG GCGACCCGAC GGATCGTCGC CGACCCCCGC
TCCCACGCAC GTGTGCTCGT GCTCACCACG TTCAACCGCG ACGACTACCT GCACGCGGCC
CTGGCCGCCG GCGCCAGCGG GTTCCTGCTC AAGACGTCCC GCCCGGACCA GCTCGCGGCG
GCCGTCCGGT CGGTCGCCGC GGGAGACGCG CTCCTCTCGC CCGAGGTGAC CCGCGCCGTC
ATCGAACGCG CTGTCGCCCG CGAAGCCGGA CCGCCGCCGG CACCGTCGCC GGCAGCGCAG
GCGCTCACGG AACGTGAGCT GGTCGTCCTG CGCCTGCTCG CCCGCGGGCT CAACAACGAC
GAGATCGCCG CCGAGCTCGT CGTCGGGCGG GCCACGGTGA AGACCCACGT CTCGAACGTG
CTCGCCAAGC TCCAGCTGCG GGACCGGGTG CAGGCCGTGG CCTACGCCTA CCGGCACGGT
CTGGCCGGAG GGGACTGA
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| Protein sequence | MSARADAVRI VLVDDQVLLR EGIATILGAQ PGLEVVGQAG SGAEALDVVA GTQPDVVCMD
VEMPGMDGIE ATRRIVADPR SHARVLVLTT FNRDDYLHAA LAAGASGFLL KTSRPDQLAA
AVRSVAAGDA LLSPEVTRAV IERAVAREAG PPPAPSPAAQ ALTERELVVL RLLARGLNND
EIAAELVVGR ATVKTHVSNV LAKLQLRDRV QAVAYAYRHG LAGGD
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