Gene Bcav_3027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3027 
Symbol 
ID7860138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3376804 
End bp3378153 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content76% 
IMG OID643867124 
Producthistidine kinase 
Protein accessionYP_002883033 
Protein GI229821507 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.256047 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000413704 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGCCCCCGA ACGACCCTGC CGCCGTCGTC GGCCGCGCGC ATCCACCCGC GCCCGAGGGC 
GCCCCGGATC CGGAGACCGC CGAGTGGCGG CGGCCGCCGG CCACGCCGGC GCAGCGACGG
AACGACGCGC TCGGCGCCGC CGGGCTCTTC GCCGGCGCCG TGCTCTCGAT GCTCCTGTAC
CGCGCGACGA ACATGCTGCC CGACCCCGCG TCGCCGCAGG TGTCCGTGCT GGTCCTGGCC
GCGGCCATCG CCCCTCTCGC GTGGCGGCGC CGGTGGCCGA GCGCCGTCGC CGGCGTGGTG
GCCGCCGCGT TCGTCGTCGC GGGCGAGATC GCGGTCCCGG AGACCGTCTT CCTCAACATC
GCCCTGTTCT GCGCCATCTA CACGGTCGGC GCGTGGGAGC TGAACCGCCG GCGGGCGGTC
GTCGTCCGGG CGCTCGTCGT CGACCTGATG CTGCTCTGGC TCCTCACCAG CTTCTTCCGC
GTCGCCACCG ACCCGCCCGA GGGCGAGGAG GTGGCGTTCG GACCCGGCGG CCTGACGCCG
CTGGCGGCGT ACCTGCTCAT CCAGCTGATG ATCAACGTCC TGTACTTCGC CGGCGCGTAC
TGGTTCGGCA ACCACGCGTG GGCGGCCGCG CGGAACCGGG CGCGGCTCGA GGAACGGGCC
CGCCAGCTCG TCGCGGAACG CGCGAAGGTC GAGGCGCAGG CCGTGACGAT CGAACGGCTC
CGCCTCGCGC GGGAGCTGCA CGACGCCGTC GCGCACCACG TCTCGCTCAT GGGCGTGCAG
GCCGCCGCGG CGCGCACGCT GGCGGCCACC GATCCCGCCC GCTCCGCGGT CGCCCTGGAG
CATGTCGAGG ACTCCGCCCG CGAGGCGGTC TCCGAGCTCC ACGGCCTGCT CGGCACGCTG
CGCGAGGACG CTCCCGCTCC CGGCGGCGAC GAACCCGTCG GCTCCCTCGG CGTCGAACGC
CTCGAGGAGC TCGTCGCCGA CGCGCGGGTC GCCGGCACGC CGGTGCGGTT CGAGGTGGTC
GGCGAGGAGG TGCGCCTGCC GCCGCTGGTC TCGCTCAACC TGTACCGCAT CGCGCAGGAG
GGGCTCACGA ACGTCCGCAA GCACGCCGGC CGCGGCGCGA GCGCGGACGT GCGCCTGCGC
TATCTCGTCG GTGCCGTGGA GCTGGAGGTG ACCGACGACG GCGCCGGTCG CCGTCGCCGG
CAGGCACCCG CGGGGACGGG CGGGCTGGGC GTGCTCGGCA TGCGCGAACG GGTCGCCGCG
GACGGGGGCA CGCTCCACGT CGGCCCGCGG CGCGGCGGCG GCTACGTCCT CCGCGCCCAC
GTGCCGCTGC CGACCGGCGG GCCCGCGTGA
 
Protein sequence
MPPNDPAAVV GRAHPPAPEG APDPETAEWR RPPATPAQRR NDALGAAGLF AGAVLSMLLY 
RATNMLPDPA SPQVSVLVLA AAIAPLAWRR RWPSAVAGVV AAAFVVAGEI AVPETVFLNI
ALFCAIYTVG AWELNRRRAV VVRALVVDLM LLWLLTSFFR VATDPPEGEE VAFGPGGLTP
LAAYLLIQLM INVLYFAGAY WFGNHAWAAA RNRARLEERA RQLVAERAKV EAQAVTIERL
RLARELHDAV AHHVSLMGVQ AAAARTLAAT DPARSAVALE HVEDSAREAV SELHGLLGTL
REDAPAPGGD EPVGSLGVER LEELVADARV AGTPVRFEVV GEEVRLPPLV SLNLYRIAQE
GLTNVRKHAG RGASADVRLR YLVGAVELEV TDDGAGRRRR QAPAGTGGLG VLGMRERVAA
DGGTLHVGPR RGGGYVLRAH VPLPTGGPA