Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_3027 |
Symbol | |
ID | 7860138 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 3376804 |
End bp | 3378153 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 643867124 |
Product | histidine kinase |
Protein accession | YP_002883033 |
Protein GI | 229821507 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.256047 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0000413704 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGCCCCCGA ACGACCCTGC CGCCGTCGTC GGCCGCGCGC ATCCACCCGC GCCCGAGGGC GCCCCGGATC CGGAGACCGC CGAGTGGCGG CGGCCGCCGG CCACGCCGGC GCAGCGACGG AACGACGCGC TCGGCGCCGC CGGGCTCTTC GCCGGCGCCG TGCTCTCGAT GCTCCTGTAC CGCGCGACGA ACATGCTGCC CGACCCCGCG TCGCCGCAGG TGTCCGTGCT GGTCCTGGCC GCGGCCATCG CCCCTCTCGC GTGGCGGCGC CGGTGGCCGA GCGCCGTCGC CGGCGTGGTG GCCGCCGCGT TCGTCGTCGC GGGCGAGATC GCGGTCCCGG AGACCGTCTT CCTCAACATC GCCCTGTTCT GCGCCATCTA CACGGTCGGC GCGTGGGAGC TGAACCGCCG GCGGGCGGTC GTCGTCCGGG CGCTCGTCGT CGACCTGATG CTGCTCTGGC TCCTCACCAG CTTCTTCCGC GTCGCCACCG ACCCGCCCGA GGGCGAGGAG GTGGCGTTCG GACCCGGCGG CCTGACGCCG CTGGCGGCGT ACCTGCTCAT CCAGCTGATG ATCAACGTCC TGTACTTCGC CGGCGCGTAC TGGTTCGGCA ACCACGCGTG GGCGGCCGCG CGGAACCGGG CGCGGCTCGA GGAACGGGCC CGCCAGCTCG TCGCGGAACG CGCGAAGGTC GAGGCGCAGG CCGTGACGAT CGAACGGCTC CGCCTCGCGC GGGAGCTGCA CGACGCCGTC GCGCACCACG TCTCGCTCAT GGGCGTGCAG GCCGCCGCGG CGCGCACGCT GGCGGCCACC GATCCCGCCC GCTCCGCGGT CGCCCTGGAG CATGTCGAGG ACTCCGCCCG CGAGGCGGTC TCCGAGCTCC ACGGCCTGCT CGGCACGCTG CGCGAGGACG CTCCCGCTCC CGGCGGCGAC GAACCCGTCG GCTCCCTCGG CGTCGAACGC CTCGAGGAGC TCGTCGCCGA CGCGCGGGTC GCCGGCACGC CGGTGCGGTT CGAGGTGGTC GGCGAGGAGG TGCGCCTGCC GCCGCTGGTC TCGCTCAACC TGTACCGCAT CGCGCAGGAG GGGCTCACGA ACGTCCGCAA GCACGCCGGC CGCGGCGCGA GCGCGGACGT GCGCCTGCGC TATCTCGTCG GTGCCGTGGA GCTGGAGGTG ACCGACGACG GCGCCGGTCG CCGTCGCCGG CAGGCACCCG CGGGGACGGG CGGGCTGGGC GTGCTCGGCA TGCGCGAACG GGTCGCCGCG GACGGGGGCA CGCTCCACGT CGGCCCGCGG CGCGGCGGCG GCTACGTCCT CCGCGCCCAC GTGCCGCTGC CGACCGGCGG GCCCGCGTGA
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Protein sequence | MPPNDPAAVV GRAHPPAPEG APDPETAEWR RPPATPAQRR NDALGAAGLF AGAVLSMLLY RATNMLPDPA SPQVSVLVLA AAIAPLAWRR RWPSAVAGVV AAAFVVAGEI AVPETVFLNI ALFCAIYTVG AWELNRRRAV VVRALVVDLM LLWLLTSFFR VATDPPEGEE VAFGPGGLTP LAAYLLIQLM INVLYFAGAY WFGNHAWAAA RNRARLEERA RQLVAERAKV EAQAVTIERL RLARELHDAV AHHVSLMGVQ AAAARTLAAT DPARSAVALE HVEDSAREAV SELHGLLGTL REDAPAPGGD EPVGSLGVER LEELVADARV AGTPVRFEVV GEEVRLPPLV SLNLYRIAQE GLTNVRKHAG RGASADVRLR YLVGAVELEV TDDGAGRRRR QAPAGTGGLG VLGMRERVAA DGGTLHVGPR RGGGYVLRAH VPLPTGGPA
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