| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3000 |
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| Symbol | |
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| ID | 7860111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | - |
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| Start bp | 3345640 |
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| End bp | 3346992 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643867098 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_002883007 |
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| Protein GI | 229821481 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCGACA GACGTACCTT CCTCGCTCTC ACCGGCGCTG CCGGCGCCGG CGCGCTCATC
ACCGGGTGCG CGAACCGGTC GGGCAGCGGT CCCAACGAGG TCCGGCTCTG GGGCATGGGC
GGCGTCGAGG CCGAGGCCCA GCAGCAGATC GTGGACGCGT TCACGGCCGA GAACCCGTCG
GTGACGGTGA GCCAGAGCCT CGTGCCCTCG ACCGGGACCG GCGACGCGAC GGCGGCCATC
ACCGCGGTCC GCGGCGGCAC CGCGCCGGAC CTGTGGCTCA TGGACCGATT CGCCGTGGCG
CAGTACGCCT CGCTCGGGCT CCTGGAACCC CTGGACCCGC TCATCGCGCA GCACGAGAAC
GACGACTTCC TCGACCAGTG GATGCCGTTC GCGCTCAACG AGCTGCGCTA CGACGGGCAG
ATCTACGGCC TGCCGTTCGA CACGGACTCC CGCGGCGTGT TCTACAACCG GACGACGCTG
GCGGACTCCG GGCTCGACCC GGACGAGCTC GACCCGTCCA ACGGGCCGGT GACGCTCGAC
CGGGTCCTGG AGATGAACGG CCAGATCGCC CAGGAGGACG ACCGGGGCAA CTACACGCGT
CTCGGCCTCA TCCCCTGGGA CGCCGAGGGG TGGGCGCTCA CCTGGATGTT CGGCAAGGGT
GCGGTGTTCT TCGACGACGC GACGTGCGCC GTCGACGTCA GCTCCGACGA GGTGGTCGGC
GTGCTCGACT CCTTCTACAC GTGGGCGCGC GAGATGGACT ACCCGCGCGT CGACGCGTTC
AAGGCGACGT ACCAGCCGCC GAACGCCCCG CCGGCACAGA CGTCGTTCTT CGGCGGTCAG
CAGGGGATGC AGATCTCCGG CCCGTTCACG ATCAACTCGA TCGCGACGTA CGTGCCCGAC
CTGGACTACG GGTTCACGTA CCTTCCGCTG TGGAACGAGG GGGACGACCC GTACACGTGG
TCGGGTGGCT TCTCGCTGGT GGCGCCGCGC GGCTCGTCGC TCTCGCCGGC CGTGTGGGAG
TTCATCAAGT TCTACTGCGG TGCCCCCGGG CAGCGGATCG CGATGACTCC GCTCAAGAAG
ATCCCGACGC ACCTGGACGT GCTCGCGGAC CCGGAAGGGT TCGACCAGAA CCTCAGCTTC
TTCGCCGACC AGCTGGAGTT CTCGACGTCG CGCCCGCCGC TGCCGATCGG GTCGCTGTTC
TGGGACTCCC TGGTGCAGGC GCAGCAGAGC GTGCTCATCG GTTCCGCCGA CGCGCAGACG
GCCGCGGAAC GTGCGCAGGC GCGGGTCACG CCGCAGATGG ACCTGTACTG CCCGTTCGAG
CTCCCGCCGG GCTTCGGGAC CACCGGAGCC TGA
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| Protein sequence | MIDRRTFLAL TGAAGAGALI TGCANRSGSG PNEVRLWGMG GVEAEAQQQI VDAFTAENPS
VTVSQSLVPS TGTGDATAAI TAVRGGTAPD LWLMDRFAVA QYASLGLLEP LDPLIAQHEN
DDFLDQWMPF ALNELRYDGQ IYGLPFDTDS RGVFYNRTTL ADSGLDPDEL DPSNGPVTLD
RVLEMNGQIA QEDDRGNYTR LGLIPWDAEG WALTWMFGKG AVFFDDATCA VDVSSDEVVG
VLDSFYTWAR EMDYPRVDAF KATYQPPNAP PAQTSFFGGQ QGMQISGPFT INSIATYVPD
LDYGFTYLPL WNEGDDPYTW SGGFSLVAPR GSSLSPAVWE FIKFYCGAPG QRIAMTPLKK
IPTHLDVLAD PEGFDQNLSF FADQLEFSTS RPPLPIGSLF WDSLVQAQQS VLIGSADAQT
AAERAQARVT PQMDLYCPFE LPPGFGTTGA
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