Gene Bcav_2960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2960 
Symbol 
ID7860071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3302835 
End bp3304058 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content77% 
IMG OID643867058 
Productgalactokinase 
Protein accessionYP_002882967 
Protein GI229821441 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0153] Galactokinase 
TIGRFAM ID[TIGR00131] galactokinase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0133618 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000169773 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGCAGCA CGTCCGGACC CGAGTGGCTC ACTGCGTGGA GCGACGACGA CGGCGCGGCG 
CGCGTCGCGT CGTCGTTCGC CTCGGTCGTG GGGGGCGCCG CCGAGGGCGT GTGGTCGGCG
CCCGGCCGGG TCAACCTCAT CGGGGAGCAC ACCGACTACA ACGGCGGCCT GTGCCTGCCG
ATCGCGATCG AGCACCGCAC GTTCGTGGCG CTGCGCCGCC GGGACGACGG CGTGGTCCGG
CTCGCGTCGG CGCAGCGTGA CGGCGTGTGG GAGGTCGCGC TCGACGGCGT CGCGCCGGGC
ACCGTGCACG GCTGGGGAGC GTACGTCGCG GGCGTCGCGT GGGCGCTCGC GGGTGACGGC
CACGACGTGC CCGGGTTCGA CGCCGTCGTC GACTCGTGCG TGCCGTTCGG CGCGGGGCTC
TCGTCGTCAG CCGCCCTCGA GAGCGCGTTC GCCGTCGCCC TCGACGACCT GCTCGGGCTC
GGGCTCGCCG CCGACGACGC CGGTCGCGCC CGGCTCGCTG CCGCCTGCGT GCGCGCCGAG
AACGAGATCG CCGGCGCGCC CACCGGAGGG ATGGACCAGG CGGCGTCGCT CCGCTCCCGC
GCCCGCCACG CGCTGCTGCT CGACTGCCTG GACCTGTCCG TGACGCACGT GCCGTACGAC
GCGTCGTCGG CCGGCCTGGA GCTGCTCGTC GTCGACACCC GCGCCCCGCA CTCCCACGTG
GACGGCGAGT ACGCGGAGCG CCGGGACGCG ACGCACGCGG CCGCGCTGGC GCTCGGCGTC
CCGACCCTGC GGGAGTGGCT CGACGCGGAC CGGAGCGTGG ACGACGCCGT CGCGGCGCTC
CCGGATGCCG TCTCCCGGCG TCGCGTGCGG CACGTGCTCA CCGAGATCGG GCGGACGCGC
GACTTCGTGA CGGCGCTGAC CGGCGGCGAC TGGGAGCGGG CCGGCCGACT CATGGATGCC
TCCCACGCCT CGCTGCGCGA CGACTACGAG GTCACGGTCC CGGAGCTCGA CACGGCAGTC
GAGACGGCAC GCTCCGAGGG CGCCGTCGGT GCGCGGATGA CGGGCGGCGG GTTCGGCGGC
TCCGCCATCG CGCTCGTCCC CGCCGGCACT GCCGGAGCCG TGGCGACGTC GGTCGCGGCG
GAGTTCGCGC GGCACGGTTT CGCGCCTCCG GCGTTCCTCA CGTCGGACGC GGCGGCGCCG
GCGGCGCGGG TGACGCCCGT CTGA
 
Protein sequence
MSSTSGPEWL TAWSDDDGAA RVASSFASVV GGAAEGVWSA PGRVNLIGEH TDYNGGLCLP 
IAIEHRTFVA LRRRDDGVVR LASAQRDGVW EVALDGVAPG TVHGWGAYVA GVAWALAGDG
HDVPGFDAVV DSCVPFGAGL SSSAALESAF AVALDDLLGL GLAADDAGRA RLAAACVRAE
NEIAGAPTGG MDQAASLRSR ARHALLLDCL DLSVTHVPYD ASSAGLELLV VDTRAPHSHV
DGEYAERRDA THAAALALGV PTLREWLDAD RSVDDAVAAL PDAVSRRRVR HVLTEIGRTR
DFVTALTGGD WERAGRLMDA SHASLRDDYE VTVPELDTAV ETARSEGAVG ARMTGGGFGG
SAIALVPAGT AGAVATSVAA EFARHGFAPP AFLTSDAAAP AARVTPV